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. 2015 Jul 7;10:22. doi: 10.1186/s13015-015-0051-7

Table 3.

Runtimes and memory requirements for MFE(k), MEA(k) (where k is the empirical Pareto front size for a given input), and their Pareto product (MFEParMEA), accumulated over 331 sequences (left) and for the longest sequence (n=356,k=38, right)

Algebra Time (min) Memory (GB) Time (min) Memory (GB)
MFE(k) alone 71 163.68 5 1.16
MEA(k) alone 61 153.51 5 1.05
MFE(k) + MEA(k) 132 (+) 163.68 (max) 10 1.16 (max)
(MFEParMEA)
 pfnosort 8 197.28 0.22 1.28
 pfsmooth 9.5 192.79 0.5 1.28
 pfsort 18 271.21 1 1.28
 pfisort 32 250.21 3 2.11

The computations were performed by using Bellman’s GAP.