Table 2.
Molecular and pedigree-based estimates of inbreeding in the genomic sub-line
| Generation | Fped | GenEq | NSEG | MB | MBAVG | F | AvHom |
|---|---|---|---|---|---|---|---|
| −5a | 0.000 | 1 | 27.5 | 181.8 | 6.67 | 0.028 | 0.758 |
| −4a | 0.000 | 2 | 28.2 | 172.9 | 6.15 | 0.021 | 0.757 |
| −3a | 0.005 | 3 | 28.3 | 172.3 | 6.10 | 0.023 | 0.758 |
| −2a | 0.011 | 4 | 29.5 | 172.3 | 5.88 | 0.028 | 0.759 |
| −1a | 0.015 | 5 | 29.8 | 172.0 | 5.77 | 0.030 | 0.760 |
| G0GS | 0.018 | 6 | 29.8 | 159.1 | 5.34 | 0.023 | 0.758 |
| G0Ped | 0.019 | 6 | |||||
| G1GS | 0.020 | 7 | 31.1 | 156.9 | 5.03 | 0.023 | 0.758 |
| G2GS | 0.023 | 8 | 31.3 | 159.8 | 5.10 | 0.030 | 0.761 |
| G1Ped | 0.022 | 7 | |||||
| G3GS | 0.028 | 9 | 31.8 | 163.3 | 5.14 | 0.036 | 0.761 |
| G4GS | 0.041 | 10 | 33.0 | 170.4 | 5.17 | 0.055 | 0.766 |
| G2Ped | 0.026 | 8 |
aOnly selected parents were genotyped, F ped average pedigree based inbreeding, GenEq average discrete generation equivalent, NSEG average number of segments with homozygosity runs longer than 50 consecutive SNPs, MB total length of homozygosity runs (Mb), MBAVG average length of homozygosity runs (Mb), F molecular inbreeding, AvHom average homozygosity