Table 1. SmLy6 family nomenclature and characteristics.
Family Name | Alternate Name(s) a | Gene Name b | Accession number c | Genome position d | Protein size (AA) e | Sh and Sj Ortholog f |
---|---|---|---|---|---|---|
SmLy6A | SmCD59a [11] SmCD59.1 [27] | Smp_019350 | XM_002573337 | Chr_1.SC_0010: 1429098–1435466 | 126 | Sha_106850 (84%) Sjp_0098860 (50%) |
SmLy6B | SmCD59b [11] SmCD59.2 [27] Dif 5 [50] | Smp_105220 | XM_002570515 | Chr_2: 23740934–23757067 | 124 | Sha_200489 (93%) Sjp_0059750 (72%) |
SmLy6C | SmCD59.3 [27] | Smp_081900.2 | XM_002579231 | Chr_1: 59144966–59146648 | 120 | Sha_200766 (69%) No Sj homolog |
SmLy6D | Sm29 [44] | Smp_072190 | XM_002578361 | Chr_1: 51486745–51491937 | 191 | Sha_102899 (64%) Sjp_0041250 (47%) |
SmLy6E | SmCD59.7 [27] | Smp_125250 | XM_002572005 | Chr_1: 38670211–38674024 | 129 | Sha_106826 (76%) No Sj homolog |
SmLy6F | SmCD59.4 [27] | Smp_166340 | XM_002579233 | Chr_1: 59132456–59139459 | 123 | No Sh homolog Sjp_0078290 (53%) |
SmLy6G | - | Smp_041550 | XM_002575463 | Chr_7.SC_0100: 1175980–1187625 | 146 | Sha_108221 (70%) No Sj homolog |
SmLy6H | - | Smp_074590 | XM_002578587 | SC_0144: 761831–769109 | 147 | Sha_200688 (95%) Sjp_0078660 (75%) |
SmLy6I | SmCD59.5 [27] | Smp_081920 | XM_002579236 | Chr_1: 59105712–59109795 | 124 | Sha_300533 (73%) No Sj homolog |
SmLy6J | - | Smp_158960 | KP835575 | SC_0167: 214022–218675 | 152 | Sha_102600 (93%) Sjp_0023000 (85%) |
SmLy6K | SmCD59.6 [27] | Smp_166350 | XM_002579234 | Chr_1: 59123155–59125102 | 114 | Sha_109174 (80%) No Sj homolog |
a) Nomenclature used in previously published literature
b) S. mansoni GeneDB ID
c) Genbank accession number for nucleotide sequence
d) position of gene in S. mansoni genome assembly version 5.1
e) Full length protein length before processing
f) percentage identity between proteins shown as % (only >45% shown).