Table 4. Repeatability and reproducibility of the real-time PCR assay.
Sample ID | DNA Ext. methods a | Repeatability b (%CV) | Reproducibility c (%CV) | |
---|---|---|---|---|
Run 1 | Run 2 | Run 1 ~ Run 2 | ||
Q10 | QG | 1.18 | 0.16 | 1.10 |
MZ5 | ZR | 0.29 | 0.74 | 0.96 |
Q25 | QG | 0.42 | 1.61 | 1.36 |
MQ54 | QG | 1.33 | 0.30 | 2.02 |
MK5 | KF | 0.30 | 0.52 | 0.36 |
Note:
a all the DNA samples were extracted with one individual mite with different extraction methods, QG = Qiagen DNeasy Blood and Tissue kit; ZR = ZR Tissue & Insect DNA kit (Zymo Research, CA, USA); KF = Kingfisher Cell and Tissue kit (Thermo Scientific, USA).
b Repeatability is calculated as the percent coefficient of variance (%CV) of Cqs of a sample within a single run.
c Reproducibility is calculated as the percent coefficient of variance of Cqs of a sample across independent runs.