Table 2. Marker Checks of the Studied SNPs.
MTHFR C677T | MTHFR A1298C | TGFβ1 869C | TNFB A252G | ApaI | BsmI | FokI | TaqI | |
---|---|---|---|---|---|---|---|---|
ID | rs1801133 | rs1801131 | rs1982073 | rs909253 | rs7975232 | rs1544410 | rs2228570 | rs731236 |
Position | 11856378 | 11854476 | 41858921 | 31540313 | 48238837 | 48239835 | 48272895 | 48238757 |
Chromosome | 1 | 1 | 19 | 6 | 12 | 12 | 12 | 12 |
Alleles Major:Minor | C:T | A:C | T:C | A:G | G:T | G:A | C:T | T:C |
Genotype % | 100% | 100% | 100% | 100% | 100% | 100% | 100% | 100% |
MAF | 0.254 | 0.416 | 0.473 | 0.343 | 0.341 | 0.4 | 0.219 | 0.395 |
ObsHET | 0.378 | 0.465 | 0.546 | 0.459 | 0.422 | 0.476 | 0.362 | 0.465 |
PredHET | 0.379 | 0.486 | 0.499 | 0.451 | 0.449 | 0.48 | 0.342 | 0.478 |
HW P-value | 1 | 0.6329 | 0.2667 | 0.9567 | 0.4773 | 0.9934 | 0.5924 | 0.8002 |