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. 2015 May 8;3(3):e00147. doi: 10.1002/prp2.147

Figure 5.

Figure 5

Effects of PAPS/PAP-binding on the mobility (RMSF) of amino acids 208–273, including Loop 3 (aa 235–268) and a portion of the dimerization domain (aa 266–275). (A) Subunit A of simulations [1], [2], and [3]. (B) Subunit B of simulations [1], [2], and [3]. A relatively high level of stability was observed for residue 250 across simulations (trough indicated by black arrow). The key indicates the PAP/PAPS-binding state of each subunit. A secondary structure map of the highlighted region is available toward the bottom of the graph (L3 = Loop 3, green cylinders = α-helix).