Table 2. List of 20 muscle differentially expressed genes (DEGs) between Yorkshire pigs with low and high RFI.
| Gene | RFI_H | RFI_L | FC(L/H) | q_value | Full Name |
|---|---|---|---|---|---|
| PPARGC1 | 65.89 | 8.63 | −7.63 | 1.52E–02 | − |
| NOR-1 | 6.83 | 1.20 | −5.68 | 1.52E−02 | − |
| Unknow1 | 5.00 | 0.88 | −5.66 | 1.52E−02 | − |
| HK2 | 23.88 | 4.99 | −4.78 | 1.52E−02 | hexokinase 2 |
| NTN1 | 11.01 | 2.39 | −4.61 | 1.52E−02 | netrin 1 |
| CST6 | 23.82 | 5.88 | −4.05 | 1.52E−02 | cystatin E/M |
| SYNJ2 | 4.93 | 1.26 | −3.92 | 1.52E−02 | synaptojanin 2 |
| ESRRB | 8.47 | 2.39 | −3.54 | 1.52E−02 | estrogen-related receptor beta |
| Unknow2 | 69.28 | 20.22 | −3.43 | 1.52E−02 | − |
| PON3 | 16.27 | 4.92 | −3.31 | 1.52E−02 | paraoxonase 3 |
| MYH6 | 7.22 | 29.23 | 4.05 | 1.52E−02 | myosin, heavy chain 6, cardiac muscle, alpha |
| Unknow12 | 0.91 | 3.73 | 4.12 | 1.52E−02 | − |
| CD1D | 0.66 | 2.92 | 4.4 | 4.55E−02 | CD1d molecule |
| Unknow13 | 1.75 | 8.22 | 4.71 | 1.52E−02 | − |
| ITGA5 | 11.20 | 64.46 | 5.75 | 1.52E−02 | integrin, alpha 5 (fibronectin receptor, alpha polypeptide) |
| GGA1 | 24.08 | 179.54 | 7.46 | 1.52E−02 | golgi-associated, gamma adaptin ear containing, ARF binding protein 1 |
| Unknow14 | 1.14 | 9.05 | 7.93 | 1.52E−02 | − |
| Unknow15 | 6713.48 | 55068.8 | 8.2 | 1.52E−02 | − |
| CYP1A1 | 0.97 | 8.18 | 8.45 | 1.52E−02 | cytochrome P450, family 1, subfamily A, polypeptide 1 |
| Unknow16 | 5.41 | 146.35 | 27.03 | 1.52E−02 | − |