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. 2015 May 7;7(6):1432–1454. doi: 10.1093/gbe/evv081

Table 4.

Estimates of Creation Rates of Novel TF-Binding Sites during Evolution

Species TFs Number of Novel TF-Binding Sites Number of New TF-Binding Sites per 100,000 Years Number of Years Required to Create One New Binding Site Chimp/Mouse and Human/Chimp Ratios of Creation Rates
Mousea NANOG 2,657 0.76 131,718
Chimpanzeeb NANOG 28,304 37.74 2,650 49.7
Modern Humansc NANOG 794 214.59 466 5.7
Chimpanzee CTCF 28,427 37.90 2,638
Modern Humans CTCF 591 159.73 626 4.2
Chimpanzee POU5F1 11,617 15.49 6,456
Modern Humans POU5F1 2,386 644.86 155 41.6
Chimpanzee RNAPII 11,693 15.59 6,414
Modern Humans RNAPII 319 86.22 1,160 5.5

aCalculated based on estimates of approximately 350-Myr evolutionary timeline between Zebrafish and Mouse.

bCalculated based on estimates of Humans and Chimpanzees split 13 Ma and 88 Myr from Euarchonta and Glires (Gliriformes) split resulting in the estimated evolutionary timeline of approximately 75 Myr.

cCalculated based on estimates of Modern Humans and Neanderthals split 370,000 years ago; estimates for CTCF, POU5F1, and RNAPII were calculated based on the assumption that all human-specific TF-binding sites emerged after Modern Humans and Neanderthals split 370,000 years ago; estimates of creation rates of primate-specific TF-binding sites were based on the assumption that all primate-specific TF-binding sites emerged before Modern Humans/Chimpanzees split 13 Ma.