Table 4.
Species | TFs | Number of Novel TF-Binding Sites | Number of New TF-Binding Sites per 100,000 Years | Number of Years Required to Create One New Binding Site | Chimp/Mouse and Human/Chimp Ratios of Creation Rates |
---|---|---|---|---|---|
Mousea | NANOG | 2,657 | 0.76 | 131,718 | |
Chimpanzeeb | NANOG | 28,304 | 37.74 | 2,650 | 49.7 |
Modern Humansc | NANOG | 794 | 214.59 | 466 | 5.7 |
Chimpanzee | CTCF | 28,427 | 37.90 | 2,638 | |
Modern Humans | CTCF | 591 | 159.73 | 626 | 4.2 |
Chimpanzee | POU5F1 | 11,617 | 15.49 | 6,456 | |
Modern Humans | POU5F1 | 2,386 | 644.86 | 155 | 41.6 |
Chimpanzee | RNAPII | 11,693 | 15.59 | 6,414 | |
Modern Humans | RNAPII | 319 | 86.22 | 1,160 | 5.5 |
aCalculated based on estimates of approximately 350-Myr evolutionary timeline between Zebrafish and Mouse.
bCalculated based on estimates of Humans and Chimpanzees split 13 Ma and 88 Myr from Euarchonta and Glires (Gliriformes) split resulting in the estimated evolutionary timeline of approximately 75 Myr.
cCalculated based on estimates of Modern Humans and Neanderthals split 370,000 years ago; estimates for CTCF, POU5F1, and RNAPII were calculated based on the assumption that all human-specific TF-binding sites emerged after Modern Humans and Neanderthals split 370,000 years ago; estimates of creation rates of primate-specific TF-binding sites were based on the assumption that all primate-specific TF-binding sites emerged before Modern Humans/Chimpanzees split 13 Ma.