Table 2.
Primer sequences used in real-time PCR analysis and ChIP assay
| Target gene | Sequence (F: forward, R: reverse) | GenBank access | Applications |
|---|---|---|---|
| TLR2 | F: GACACCGCCATCCTCATTCT | NC_010450 | PCR |
| R: CTTCCCGCTGCGTCTCAT | |||
| TLR4 | F: TCTACATCAAGTGCCCCTAC | NR_024169.1 | PCR |
| R: TAAATTCTCCCAAAACCAAC | |||
| TNF-α | F:CCACGCTCTTCTGCCTACTGC | JF831365.1 | PCR |
| R:TCGGCTTTGACATTGGCTACAA | |||
| NF-κB | F:GGGGACTACGACCTGAATGC | EU399817.1 | PCR |
| R:CACGGTTGTCAAAGATGGG | |||
| IL-1α | F:TACTGACTATGGCTACCAA | NM_214029.1 | PCR |
| R:ATTCCAGCTGCTATTGTG | |||
| ACC-1 | F:GGCCATCAAGGACTTCAACC | NM_001114269.1 | PCR |
| R:ACGATGTAAGCGCCGAACTT | |||
| FAS | F: GTCCTGCTGAAGCCTAACTC | EF589048 | PCR |
| R: TCCTTGGAACCGTCTGTG | |||
| SCD-1 | F: CCCAGCCGTCAAAGAGAA | NM_213781 | PCR |
| R: CGATGGCGTAACGAAGAAA | |||
| PPAR-γ | F: GCCCTTCACCACTGTTGATT | NM_138711 | PCR |
| R: GAGTTGGAAGGCTCTTCGTG | |||
| C/EBP-β | F: GACAAGCACAGCGACGAGTA | NM_001199889 | PCR |
| R: AGCTGCTCCACCTTCTTCTG | |||
| HSL | F: ACCCTCGGCTGTCAACTTCTT | AY686758 | PCR |
| R: TCCTCCTTGGTGCTAATCTCGT | |||
| ATGL | F: ACCTGTCCAACCTGCTGC | EF583921 | PCR |
| R: GCCTGTCTGCTCCTTTATCCA | |||
| CPT-1α | F:ACAACGAGGTCTTCCGAT | NM_001129805.1 | PCR |
| R:AACGCAAAACCACCAAACCC | |||
| ND1 | F: TCCTACTGGCCGTAGCATTCCT | KF888634.1 | PCR |
| R: TTGAGGATGTGGCTGGTCGTAG | |||
| ND2 | F: ATCGGAGGGTGAGGAGGGCTAA | KF888634.1 | PCR |
| R: GTTGTGGTTGCTGAGCTGTGGA | |||
| ND3 | F: AGCACGCCTCCCATTCTCAAT | KF888634.1 | PCR |
| R: TGCTAGGCTTGCTGCTAGTAGG | |||
| ND4 | F: TCGCCTATTCATCAGTAAGTCA | KF888634.1 | PCR |
| R: GGATTATGGTTCGGCTGTGTA | |||
| ND4L | F: GATCGCCCTTGCAGGGTTACTT | KF888634.1 | PCR |
| R: CTAGTGCAGCTTCGCAGGCT | |||
| ND5 | F: CGGATGAGAAGGCGTAGGAA | KF888634.1 | PCR |
| R: GCGGTTGTATAGGATTGCTTGT | |||
| ND6 | F: ACTGCTATGGCTACTGAGATGT | KF888634.1 | PCR |
| R: CTTCCTCTTCCTTCAACGCATA | |||
| COX1 | F: TGGTGCCTGAGCAGGAATAGTG | KF888634.1 | PCR |
| R: ATCATCGCCAAGTAGGGTTCCG | |||
| COX2 | F: GCTTCCAAGACGCCACTTCAC | KF888634.1 | PCR |
| R: TGGGCATCCATTGTGCTAGTGT | |||
| COX3 | F: GGCTACAGGGTTTCACGGGTTG | KF888634.1 | PCR |
| R: TCAGTATCAGGCTGCGGCTTCA | |||
| ATP6 | F: ACTCATTCACACCCACCACACA | KF888634.1 | PCR |
| R: CCTGCTGTAATGTTGGCTGTCA | |||
| ATP8 | F: TGCCACAACTAGATACATCC | KF888634.1 | PCR |
| R: GCTTGCTGGGTATGAGTAG | |||
| CYTB | F: CTGAGGAGCTACGGTCATCACA | KF888634.1 | PCR |
| R: GCTGCGAGGGCGGTAATGAT | |||
| PPIA | F: TCCTCCTTGGTGCTAATCTCGT | NM_214353.1 | PCR |
| R: TGATCTTCTTGCTGGTCTT | |||
| ACC-1_promoter | F: ACAGCATACGGAGTTCCTGG | ChIP | |
| R: TGTCTTCTGCAACAATGGGA |