Table 1. Genome-wide association between ROH and DPR or SCS.

Trait 1	BTA	Position (Mb) 2	-log10(p) 3	Effect	Position (Mb)	F L 4	ROH-FPED 5
DPR	3	40.04–44.47	10.06	-0.41	40.89	0.55	10.53**
		53.36–54.68	5.41	-0.33	54.65	0.27	1.27
	7	42.54–45.14	4.28	-0.27	44.53	0.61	1.02
	8	10.53–16.60	7.14	-0.42	13.81	0.20	7.01**
	12	34.66–42.08	4.78	-0.40	40.37	0.13	5.26**
		87.75–89.21	4.39	-0.33	89.09	0.20	9.27**
SCS	1	50.73–53.53	4.99	0.04	52.68	0.46	6.01**
		132.26–135.40	5.17	0.05	134.65	0.27	8.93**
	3	40.04–44.07	6.41	0.05	43.16	0.54	9.82**
	4	8.07–12.51	9.04	0.07	8.07	0.26	6.43**
	5	81.71–82.58	4.61	0.05	81.71	0.21	3.03**
	7	40.27–45.14	4.65	0.04	41.19	0.61	0.96
	13	58.05–59.22	5.32	-0.06	58.72	0.16	4.47*
	21	11.08–12.75	5.42	0.06	11.08	0.16	6.82**
		25.03–25.94	4.58	0.06	25.04	0.12	5.54**

¹DPR = daughter pregnancy rate; SCS = somatic cell score.

²Regions was defined by genome-wide suggestive level of ROH-trait associations.

³Maximum association in the region.

⁴ F _L ⁼ ROH of a SNP locus.

⁵**1%, *5%, genome-wide thresholds of association between ROH and FPED without considering stratification. The value shows-log₁₀(p-value).