Table 1. Amino acid sequences and properties of the peptides.
Peptide | Sequence | MW | Net charge | Hydrophilicity |
---|---|---|---|---|
Papiliocin | RWKIFKKIEKVGRNVRDGIIKAGPAVAVVGQAATVVK-NH2 | 4002.8 | 8 | 0.19 |
Papiliocin-2A | RAKIFKKIEKVGRNVRDGIIKAGPAVAVVGQAATVVK-NH2 | 3887.7 | 8 | 0.27 |
Papiliocin-5A | RWKIAKKIEKVGRNVRDGIIKAGPAVAVVGQAATVVK-NH2 | 3926.7 | 8 | 0.24 |
Papiliocin-2A5A | RAKIAKKIEKVGRNVRDGIIKAGPAVAVVGQAATVVK-NH2 | 3811.6 | 8 | 0.32 |
PapN | RWKIFKKIEKVGRNVRDGIIKA-NH2 | 2654.2 | 7 | 0.62 |
PapN-2A | RAKIFKKIEKVGRNVRDGIIKA-NH2 | 2539.1 | 7 | 0.77 |
PapN-5A | RWKIAKKIEKVGRNVRDGIIKA-NH2 | 2578.1 | 7 | 0.71 |
PapN-2A5A | RAKIAKKIEKVGRNVRDGIIKA-NH2 | 2463.0 | 7 | 0.89 |
PapN-2F5W | RFKIWKKIEKVGRNVRDGIIKA-NH2 | 2655.2 | 7 | 0.62 |
PapC | AVAVVGQAATVVK-NH2 | 1268.5 | 2 | −0.55 |
*Hydrophilicity is the total hydrophilicity (sum of all residue hydrophilicity indices) divided by the number of residues, according to the Hopp and Woods index (66).