Table 4.

Comparison of fold change values from RNA-seq data and qRT-PCR in 2 h LPS and Poly I:C treated BV-2 microglia cells

RNA-seq fold change				qRT-PCR fold change
Gene symbol	Gene accession ID	LPS_2h	Poly I:C_2h	LPS_2h	Poly I:C_2h
Il-1ß	NM_008361	93.82	96.13	89.02	96.72
Il1A	NM_010554	57.04	82.69	67.98	99.02
TNF	NM_001278601	51.12	45.94	55.94	69.01
PTGS2	NM_011198	32.41	51.93	36.5	35.09
CXCL10	NM_021274	34.74	88.57	12.53	87.45
CCL4	NM_013652	50.02	60.01	65.23	42.25
CCL7	NM_013654	17.41	44.98	52.23	35.26
CCL3	NM_011337	37.15	22.61	39.66	22.23
NFκBIA	NM_010907	38.57	33.60	42.36	30.21
IRF7	NM_001252600	21.59	34.28	19.68	26.35
JUNB	NM_008416	20.3	22.01	22.25	22.02
IRF1	NM_001159393	14.31	26.35	16.79	18.23
CLEC4E	NM_019948	53.91	53.29	47.52	45.25
GPR84	NM_030720	44.69	47.16	51.25	41.23
SLC15A3	NM_023044	18.0	16.23	22.03	11.23
KDM4A	NM_001161823	23.29	18.41	19.55	16.23
KLF7	NM_033563	4.89	3.85	1.04	0.909
IRAK3	NM_028679	4.97	4.25	0.77	0.89