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. 2015 Apr 7;9(11):2373–2385. doi: 10.1038/ismej.2015.46

Figure 2.

Figure 2

Phylogenetic placement of A. lacustris. A. lacustris and branch support values on branches of interest have been marked with bold red. (a) Phylogenetic tree based on a concatenated alignment of 64 Rickettsiales panorthologs. Tree topology and posterior probability branch support values (shown below branches) were inferred using PhyloBayes (model: CAT-Poisson). Bootstrap branch support values (shown above branches) were calculated with RAxML (model: Γ+LG). Separate full RAxML and PhyloBayes phylogenetic trees are shown in Supplementary Figure 1. (b) Phylogenetic tree based on SSU rRNA gene. Tree topology and bootstrap support values (shown above branches) were inferred with RAxML. Major taxonomic groups have been collapsed to improve readability. Full phylogenetic tree is shown in Supplementary Figure 2.