TABLE 1.
ASC | Reduced ASC | D144N ASC | |
---|---|---|---|
Data collection statistics | |||
Resolution rangea (Å) | 41.41–2.21 (2.29–2.21) | 41.37–2.32 (2.40–2.32) | 85.01–2.59 (2.68–2.59) |
Space group | P212121 | P212121 | P61 |
Unit cell | |||
a, Å | 37.7 | 37.6 | 105.3 |
b, Å | 84.6 | 83.8 | 105.3 |
c, Å | 142.5 | 142.7 | 235.4 |
α, ° | 90 | 90 | 90 |
β, ° | 90 | 90 | 90 |
γ, ° | 90 | 90 | 120 |
Total reflectionsa | 166,023 (15,823) | 73,154 (7344) | 264,923 (26,696) |
Unique reflectionsa | 23,611 (2286) | 20,028 (1992) | 45,769 (4610) |
Completenessa (%) | 99.86 (99.87) | 98.45 (100.00) | 99.97 (99.85) |
Multiplicitya | 7.0 (6.9) | 3.6 (3.7) | 5.8 (5.8) |
Mean I/σ(I)a | 12.67 (1.31) | 9.11 (1.45) | 15.60 (1.66) |
Rmergea,b | 0.1275 (1.477) | 0.118 (0.8846) | 0.1212 (1.209) |
Refinement statistics | |||
Rworka,c (%) | 18.44 (30.68) | 18.70 (26.78) | 16.94 (28.38) |
Rfreea,d (%) | 24.96 (38.85) | 25.89 (30.43) | 22.80 (32.22) |
Number of non-hydrogen atoms | 3333 | 3260 | 6575 |
Macromolecules | 3191 | 3191 | 6530 |
Ligands | 15 | 9 | 16 |
Water | 127 | 60 | 29 |
Protein residues | 366 | 366 | 749 |
r.m.s.e deviation from ideality | |||
Bond length (Å) | 0.01 | 0.011 | 0.012 |
Bond angles (°) | 1.4 | 1.37 | 1.45 |
Ramachandran plotf (%) | |||
Favored | 96.2 | 95.6 | 92.1 |
Allowed | 3.2 | 3.5 | 5.3 |
Outliers | 0.6 | 0.9 | 2.6 |
Average B-factor | 57.6 | 64.5 | 57.7 |
Macromolecules | 58 | 64.8 | 57.8 |
Ligands | 54.7 | 46.7 | 38.2 |
Solvent | 48.3 | 53.7 | 44.6 |
PDB ID | 4YOQ | 4YPH | 4YPR |
a Values in parenthesis refer to the highest resolution shell.
b Rmerge = Σ|I − 〈I〉 |/Σ〈I〉; where I is the observed intensity.
c Rwork = Σ|Fo − Fc |/Σ|Fo|; where Fo and Fc are the observed and calculated structure factor amplitudes, respectively.
d Rfree was calculated based on 5% data randomly selected and omitted throughout structure refinement (32).
e r.m.s., root mean square.
f Calculated using MOLPROBITY (33).