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. 2015 Jul 10;6:696. doi: 10.3389/fmicb.2015.00696

FIGURE 3.

FIGURE 3

Multifurcation maximum likelihood phylogenetic reconstruction based on the Reps of CRESS-DNA genomes recovered here, metagenomic CRESS-DNA viruses, cycloviruses, circoviruses, and representative members of the Nanoviridae and Geminiviridae families. Reps obtained from CRESS-DNA genomes obtained in this study are highlighted in blue font. Branches are colored for the different CRESS-DNA viral groups including the Marine Clade 1 (red), circoviruses (purple), cycloviruses (pink), nanoviruses (orange), and geminiviruses (green). Representative nanoviruses (n = 4) and geminiviruses (n = 15) have been condensed into their family names. Reps from genomes exhibiting a single ORF are highlighted using an asterisk (). Branches with less than 60% aLRT branch support have been collapsed. Description of acronyms used can be found in Supplementary Table S4.