Table 1. Characteristics of studies included in the current meta-analysis.
Surname | Year | Country | Ethnicity | Source | Genotype method | Case |
control |
MAF | HWE | Score | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
WW | VW | VV | ALL | WW | VW | VV | ALL | |||||||||
For rs1447295 C>A (region1) | ||||||||||||||||
Chan | 2013 | Singapore | Asian | HB | Illumina 1M chip | 180 | 92 | 17 | 289 | 94 | 44 | 5 | 143 | 0.19 | 0.957 | 7 |
Schumacher | 2007 | USA | Caucasians | PB | TaqMan | 8462 | 2736 | 268 | 11466 | 10344 | 2472 | 172 | 12988 | 0.11 | 0.079 | 14 |
Zheng | 2007 | USA | Caucasians | HB | iPLEX | 1169 | 346 | 31 | 1546 | 485 | 82 | 4 | 571 | 0.08 | 0.794 | 11 |
Joung | 2012 | Korea | Asian | HB | iPLEX | 114 | 67 | 12 | 193 | 127 | 38 | 3 | 168 | 0.13 | 0.936 | 7 |
Francisco | 2013 | Chile | Caucasians | HB | TaqMan | 56 | 23 | 4 | 83 | 16 | 4 | 1 | 21 | 0.14 | 0.309 | 4 |
Terada | 2008 | Japan | Asian | HB | PCR-RFLP | 310 | 172 | 25 | 507 | 335 | 165 | 11 | 511 | 0.18 | 0.071 | 9 |
Okobia | 2011 | USA | Africa-American | HB | TaqMan | 156 | 162 | 36 | 354 | 173 | 207 | 58 | 438 | 0.37 | 0.291 | 11 |
Brankovie | 2013 | Sebia | Caucasians | HB | PCR-RFLP | 86 | 61 | 3 | 150 | 11 | 82 | 7 | 100 | 0.48 | 0.000 | 7 |
Suurinirmi | 2007 | USA | Caucasians | PB | TaqMan | 435 | 136 | 11 | 582 | 427 | 107 | 4 | 538 | 0.11 | 0.390 | 15 |
Zeegers | 2011 | USA | Caucasians | PB | TaqMan | 224 | 53 | 4 | 281 | 196 | 64 | 7 | 267 | 0.15 | 0.523 | 10 |
Salinas | 2008 | USA | Caucasians | PB | TaqMan | 937 | 288 | 27 | 1252 | 994 | 225 | 14 | 1233 | 0.10 | 0.753 | 15 |
Benford | 2010 | USA | Africa-American | HB | TaqMan | 86 | 77 | 26 | 189 | 237 | 221 | 65 | 523 | 0.34 | 0.000 | 8 |
Liu | 2012 | China | Asian | PB | PCR-RFLP | 150 | 102 | 8 | 260 | 197 | 86 | 4 | 287 | 0.16 | 0.111 | 11 |
Liu | 2009 | Japan | Asian | HB | TaqMan | 217 | 149 | 25 | 391 | 218 | 89 | 16 | 323 | 0.19 | 0.088 | 8 |
Severi | 2007 | Australian | Caucasians | PB | TaqMan | 595 | 212 | 14 | 821 | 586 | 135 | 11 | 732 | 0.11 | 0.319 | 13 |
Wokolorczyk | 2010 | Poland | Caucasians | HB | PCR-RFLP | 515 | 156 | 19 | 690 | 484 | 115 | 3 | 602 | 0.10 | 0.165 | 8 |
Chen | 2009 | Taiwan | Asian | PB | TaqMan | 215 | 119 | 6 | 340 | 253 | 75 | 9 | 337 | 0.14 | 0.237 | 10 |
Cheng | 2008 | USA | Caucasians | HB | TaqMan | 318 | 97 | 2 | 417 | 344 | 69 | 4 | 417 | 0.09 | 0.795 | 11 |
Cheng | 2008 | USA | Africa-American | HB | TaqMan | 39 | 44 | 6 | 89 | 43 | 35 | 11 | 89 | 0.32 | 0.919 | 11 |
Zheng | 2010 | China | Asian | PB | iPLEX | 173 | 96 | 15 | 284 | 110 | 35 | 6 | 151 | 0.16 | 0.147 | 12 |
For rs16901979 C>A (region2) | ||||||||||||||||
Chan | 2013 | Singapore | Asian | HB | Illumina 1M chip | 139 | 119 | 31 | 289 | 64 | 68 | 12 | 144 | 0.32 | 0.302 | 7 |
Joung | 2012 | Korea | Asian | HB | iPLEX | 99 | 81 | 14 | 194 | 100 | 57 | 12 | 169 | 0.24 | 0.333 | 7 |
Okobia | 2011 | USA | Africa-American | HB | TaqMan | 81 | 158 | 99 | 338 | 131 | 193 | 102 | 426 | 0.47 | 0.064 | 11 |
Chen | 2010 | Taiwan | Asian | HB | TaqMan | 148 | 148 | 35 | 331 | 173 | 138 | 24 | 335 | 0.28 | 0.62 | 11 |
Benford | 2010 | USA | Africa-American | HB | TaqMan | 45 | 97 | 50 | 192 | 188 | 237 | 87 | 512 | 0.40 | 0.406 | 8 |
Cheng | 2008 | USA | Caucasians | HB | TaqMan | 375 | 41 | 1 | 417 | 393 | 22 | 1 | 416 | 0.03 | 0.252 | 11 |
Cheng | 2008 | USA | Africa-American | HB | TaqMan | 23 | 43 | 23 | 89 | 27 | 50 | 11 | 88 | 0.41 | 0.1 | 11 |
For rs6983267 T>G (region3) | ||||||||||||||||
Chan | 2013 | Singapore | Asian | HB | Illumina 1M chip | 89 | 136 | 63 | 288 | 47 | 74 | 23 | 144 | 0.42 | 0.493 | 7 |
Zheng | 2007 | USA | Caucasians | HB | iPLEX | 495 | 771 | 285 | 1551 | 142 | 299 | 132 | 573 | 0.49 | 0.293 | 11 |
Joung | 2012 | Korea | Asian | HB | iPLEX | 56 | 92 | 46 | 194 | 51 | 86 | 31 | 168 | 0.44 | 0.618 | 7 |
Francisco | 2013 | Chile | Caucasians | HB | TaqMan | 19 | 33 | 30 | 82 | 5 | 13 | 3 | 21 | 0.45 | 0.253 | 4 |
Terada | 2008 | Japan | Asian | HB | PCR-RFLP | 211 | 219 | 77 | 507 | 206 | 225 | 80 | 511 | 0.38 | 0.94 | 9 |
Okobia | 2011 | USA | Africa-American | HB | TaqMan | 307 | 34 | 2 | 343 | 373 | 52 | 1 | 426 | 0.06 | 0.562 | 11 |
Brankovie | 2013 | Sebia | Caucasians | HB | PCR-RFLP | 53 | 80 | 17 | 150 | 69 | 129 | 52 | 250 | 0.47 | 0.561 | 7 |
Salinas | 2008 | USA | Caucasians | PB | PCR-RFLP | 364 | 652 | 242 | 1258 | 313 | 617 | 308 | 1238 | 0.50 | 0.91 | 15 |
Liu | 2012 | China | Asian | PB | PCR-RFLP | 70 | 137 | 53 | 260 | 94 | 137 | 51 | 282 | 0.42 | 0.93 | 11 |
Liu | 2009 | Japan | Asian | HB | TaqMan | 151 | 181 | 59 | 391 | 147 | 151 | 25 | 323 | 0.31 | 0.104 | 8 |
Papanikolopoulou | 2011 | Greece | Caucasians | HB | TaqMan | 16 | 46 | 24 | 86 | 39 | 47 | 13 | 99 | 0.37 | 0.844 | 6 |
Cheng | 2008 | USA | Caucasians | HB | TaqMan | 76 | 215 | 126 | 417 | 106 | 206 | 105 | 417 | 0.50 | 0.807 | 11 |
Cheng | 2008 | USA | Africa-American | HB | TaqMan | 74 | 14 | 1 | 89 | 74 | 11 | 4 | 89 | 0.11 | 0.001 | 11 |
Zheng | 2010 | China | Asian | PB | iPLEX | 86 | 134 | 62 | 282 | 51 | 72 | 29 | 152 | 0.43 | 0.69 | 12 |
Penney | 2009 | USA | Caucasians | PB | iPLEX | 400 | 644 | 261 | 1305 | 372 | 707 | 323 | 1402 | 0.48 | 0.714 | 15 |
Penney | 2009 | USA | Caucasians | PB | iPLEX | 1184 | 1776 | 812 | 3772 | 69 | 134 | 46 | 249 | 0.45 | 0.177 | 15 |
HB, Hospital based; PB, Population based; PCR-RFLP, Polymorphism chain reaction-restriction fragment length polymorphism; MAF, Minor allele frequency; HWE, Hardy-Weinberg equilibrium. WW, wild homozygous; WV, heterozygous; VV, variant homozygous.