Skip to main content
. Author manuscript; available in PMC: 2016 Mar 1.
Published in final edited form as: J Am Stat Assoc. 2015 Jan 22;110(510):503–514. doi: 10.1080/01621459.2014.995794

Figure 3.

Figure 3

A simulation example. The plots show the feature allocation matrix Z, with shaded area indicating zsc = 1, i.e., variant genotype. Rows are the SNVs and columns are the inferred haplotypes. Panel (a) shows the simulation truth Zo. Panel (b) displays the estimated feature allocation matrix for λ2 = 8 and 10. The estimate perfectly recovers the simulation truth. Panel (c) shows b for λ2 = 6. The first four haplotypes match the simulation truth.