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. Author manuscript; available in PMC: 2016 Mar 1.
Published in final edited form as: J Am Stat Assoc. 2015 Jan 22;110(510):503–514. doi: 10.1080/01621459.2014.995794

Figure 5.

Figure 5

Summary of intra-TH analysis for four samples from a lung tumor with 17,160 SNVs. (a): The first heatmap shows posterior estimated haplotype genotypes (columns) of the selected SNVs. Three haplotypes are identified. A green/red block indicates a mutant/wildtype allele at the SNV in the haplotype. The second heatmap shows the differences between haplotypes 1 and 3 in the first heatmap. (b): The first heatmap shows the estimated uncertainties of three estimated haplotypes for 17,160 SNVs. The second heatmap shows the estimated uncertainties of 1,464 SNVs that differentiate haplotypes 1 and 3 in the first heatmap. (c): A circos plot showing the estimated proportion ŵtc with Ĉ = 3 haplotypes in each sample. The four samples possess similar proportions.