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. 2015 Jun 27;71(Pt 7):831–837. doi: 10.1107/S2053230X1500967X

Table 2. Selection of the 35 PDB-derived ligands selected to formulate MORPHEUS II.

Number of structures (i.e. occurrences in the PDB) showing a main chemical as an ordered ligand (as of December 2014). Note that a few reagents that were not found in the PDB were integrated to complete the formulations (the four polyols used as cryoprotectants and five of the six buffers used to formulate the buffer systems).

Chemical name Type PDB ID (main) No. of structures
Lithium sulfate Common salt LI 51
Sodium chloride Common salt NA 4726
Potassium sulfate Common salt K 1638
Manganese chloride tetrahydrate Divalent cation MN 1938
Cobalt chloride hexahydrate Divalent cation CO 474
Nickel chloride hexahydrate Divalent cation NI 699
Zinc acetate dihydrate Divalent cation ZN 8413
Barium acetate Alkali BA 91
Cesium acetate Alkali CS 75
Rubidium chloride Alkali RB 34
Strontium acetate Alkali SR 101
Sodium chromate tetrahydrate Oxometalate CR 7
Sodium molybdate dihydrate Oxometalate MOO 20
Sodium orthovanadate Oxometalate VO4 73
Sodium tungstate dihydrate Oxometalate WO4 47
Erbium(III) chloride hexahydrate Lanthanide ER3 2
Terbium(III) chloride hexahydrate Lanthanide TB 11
Ytterbium(III) chloride hexahydrate Lanthanide YB 57
Yttrium(III) chloride hexahydrate Lanthanide YT3 33
Xylitol Monosaccharide XYL 25
D-()-Fructose Monosaccharide FRU; FUD 36; 4
D-Sorbitol Monosaccharide SOR 12
myo-Inositol Monosaccharide INS 16
L-Rhamnose monohydrate Monosaccharide RAM 43
DL-Threonine Amino-acid DTH; THR 23; n/a
DL-HistidineHClH2O Amino-acid DHI; HIS 24; n/a
DL-5-HydroxylysineHCl Amino-acid n/a; LYZ 0; 7
trans-4-Hydroxy-L-proline Amino-acid HYP 149
Spermine4HCl Polyamine SPM 105
Spermidine3HCl Polyamine SPD 33
1,4-Diaminobutane2HCl Polyamine PUT 22
DL-OrnithineHCl Polyamine ORD; ORN 3; 56
NDSB 256 Surfactant DMX 4
NDSB 195 Surfactant NDS 7
Bis-tris Buffer BTB 114