Table 1. The novel soybean miRNAs verified using qRT-PCR.
miRNA ID | Sequence (5’-3’) | Length (nt) | Start/end precursor | Length of precursors (nt) | Arm | MFE (kcal/mol) |
---|---|---|---|---|---|---|
Soybean-miR-4 | AAUGAGAACUUUGAAGGCCGAA | 22 | 9955786–9955874 | 88 | 3p | -18.10 |
Soybean-miR-35 | GGAAUGGGCUGAUUGGGAA | 19 | 7783821–7783912 | 92 | 5p | -45.70 |
Soybean-miR-36 | GGAGUGAAAUAGAACAUGAAA | 21 | 13036509–13036600 | 91 | 5p | -20.00 |
Soybean-miR-57 | UAUGGGGGGAUUGGGAAGGAA | 21 | 35360317–35360403 | 86 | 5p | -40.30 |
Soybean-miR-60 | UCUUCCCUACACCUCCCAUACC | 22 | 35360314–35360403 | 89 | 3p | -43.50 |
Soybean-miR-64 | UGAGAACUUUGAAGGCCGAA | 20 | 9955786–9955874 | 88 | 3p | -18.10 |
Soybean-miR-77 | UUCUGAACCAGACUUUGAUGUC | 22 | 20678566–20678664 | 98 | 5p | -25.50 |