Table 1.
Significant motifs associated to nucleolar proteins implicated in ribosome biogenesis. The columns titled "C", "F" and "P" correspond to the three branches of the Gene Ontology: cellular component, molecular function and biological process respectively.
| motif | C | F | P |
| GATGAGA | nucleolus | - | ribosome biogenesis |
| GATGAGAT | nucleolus | - | ribosome biogenesis |
| ATGAGAT | nucleolus | - | ribosome biogenesis |
| ATGAGATG | - | - | ribosome biogenesis |
| TGAGATG | - | - | ribosome biogenesis and assembly |
| TGAGATGA | - | - | ribosome biogenesis and assembly |
| GAGATG | - | - | ribosome biogenesis and assembly |
| GAGATGAG | nucleolus | - | ribosome biogenesis and assembly |
| GAGATGA | nucleolus | - | ribosome biogenesis and assembly |
| AGATGAG | nucleolus | - | ribosome biogenesis |
| GATGAG | nucleolus | - | ribosome biogenesis |
| GATGA | - | - | ribosome biogenesis |
| ATGAGCT | nucleolus | - | ribosome biogenesis |
| TGAGCT | nucleolus | - | rRNA processing |
| GATGAGATGAGCT | |||
| AAAAATT | nucleolus | - | ribosome biogenesis |
| AAAAATTT | nucleolus complex | - | transcription from Pol I promoter |
| AAAATT | nucleolus | - | ribosome biogenesis |
| AAAATTT | nucleolus | - | ribosome biogenesis |
| AAAATTTT | nucleolus | - | ribosome biogenesis |
| AAATT | nucleolus | - | 35S primary transcript processing |
| AAATTTTC | small nucleolar ribonucleoprotein complex | - | 35S primary transcript processing |
| AAAAATTTTC |