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. 2015 Mar 14;60(8):2236–2245. doi: 10.1007/s10620-015-3615-y

Table 3.

Infectious causes of diarrhea in patients with HIV diagnosed by endoscopy or colonoscopy [41, 4548]

Pathogen Endoscopy Colonoscopy
Bacteria Salmonella Salmonella, Shigella, Campylobacter
Enteropathogenic and enterotoxigenic Escherichia coli (small intestine) Enterohemorrhagic E coli, enteroinvasive E coli
Small intestine bacterial overgrowth Clostridium difficile
Mycobacterium avium complex Mycobacterium avium complex
Protozoa Cryptosporidia (small intestine) Cryptosporidia
Microsporidia (most often in proximal jejunum) Entamoeba histolytica
Giardia (upper small intestine)
Cyclospora (small intestine)
Isospora (small intestine)
Viruses CMV CMV
HSV HSV (rectum, sigmoid)
Adenovirus
Fungi Histoplasma (most commonly terminal ileum; can affect any part of the GI tract) Histoplasma (most commonly terminal ileum; can affect any part of the GI tract)

Based on either appearance of mucosa in endoscopy/colonoscopy or mucosal biopsy

CMV cytomegalovirus, GI gastrointestinal, HIV human immunodeficiency virus, HSV herpes simplex virus