Fig. 3.

An allele specific methylation example near PAX6. a Potential allele-specific methylation patterns were discovered in LNCaP cell line near gene PAX6. The first row is the overall methylation level associated with the reference allele. The second row is the overall methylation level associated with the variant allele (indicated by the blue bar). Significant methylation co-occurrence patterns in LNCaP (b), in DU145 (c), and in PrEC (d) for the same region. Coordinates used here are based on hg18