Table 2.

Simulation results under different numbers of genes, G, and different percentages of censored data. Cens stands for the percentage of censored data, Sens for sensitivity, Spec for specificity, and IBS for integrated Brier score. The best values are shown in boldface.

G	Cens	Method	AUC	Sens	Spec	C-index	IBS
208	0	BNL	0.993 (0.014)	0.975 (0.032)	0.999 (0.002)	0.956 (0.015)	0.014 (0.011)
208	0	BNLR	0.989 (0.023)	0.950 (0.096)	0.999 (0.003)	0.960 (0.040)	0.016 (0.019)
208	0	CPH-L1	0.742 (0.083)	0.571 (0.188)	0.912 (0.031)	0.793 (0.09)	0.098 (0.046)
208	0	AFT-BVS	0.990 (0.016)	0.968 (0.035)	0.999 (0.002)	0.964 (0.015)	0.013 (0.008)
208	30	BNL	0.991 (0.019)	0.950 (0.083)	0.994 (0.008)	0.931 (0.033)	0.051 (0.032)
208	30	BNLR	0.856 (0.084)	0.509 (0.171)	0.981 (0.01)	0.826 (0.078)	0.126 (0.074)
208	30	CPH-L1	0.646 (0.064)	0.367 (0.146)	0.925 (0.033)	0.759 (0.078)	0.174 (0.079)
208	30	AFT-BVS	0.862 (0.110)	0.586 (0.286)	0.983 (0.013)	0.837 (0.095)	0.105 (0.071)
208	50	BNL	0.983 (0.034)	0.870 (0.142)	0.988 (0.013)	0.903 (0.055)	0.084 (0.067)
208	50	BNLR	0.831 (0.064)	0.448 (0.136)	0.979 (0.008)	0.811 (0.075)	0.174 (0.088)
208	50	CPH-L1	0.595 (0.048)	0.250 (0.112)	0.94 (0.027)	0.737 (0.085)	0.227 (0.093)
208	50	AFT-BVS	0.711 (0.085)	0.274 (0.153)	0.974 (0.011)	0.760 (0.078)	0.195 (0.089)
516	0	BNL	1.00 (0.00)	0.999 (0.001)	0.999 (0.001)	0.962 (0.010)	0.012 (0.010)
516	0	BNLR	0.950 (0.073)	0.761 (0.282)	0.989 (0.014)	0.921 (0.079)	0.029 (0.032)
516	0	CPH-L1	0.683 (0.061)	0.412 (0.135)	0.953 (0.018)	0.792 (0.055)	0.083 (0.039)
516	0	AFT-BVS	0.999 (0.001)	0.997 (0.009)	0.997 (0.002)	0.967 (0.009)	0.011 (0.009)
516	30	BNL	0.976 (0.030)	0.812 (0.153)	0.981 (0.015)	0.866 (0.046)	0.102 (0.063)
516	30	BNLR	0.769 (0.087)	0.369 (0.133)	0.969 (0.013)	0.784 (0.062)	0.161 (0.081)
516	30	CPH-L1	0.606 (0.049)	0.25 (0.11)	0.962 (0.018)	0.763 (0.065)	0.169 (0.074)
516	30	AFT-BVS	0.717 (0.085)	0.335 (0.141)	0.963 (0.008)	0.775 (0.071)	0.155 (0.088)
516	50	BNL	0.920 (0.073)	0.650 (0.197)	0.973 (0.012)	0.844 (0.060)	0.134 (0.070)
516	50	BNLR	0.739 (0.060)	0.333 (0.103)	0.968 (0.012)	0.779 (0.075)	0.204 (0.096)
516	50	CPH-L1	0.580 (0.038)	0.194 (0.087)	0.965 (0.015)	0.742 (0.069)	0.217 (0.084)
516	50	AFT-BVS	0.652 (0.065)	0.215 (0.073)	0.961 (0.008)	0.730 (0.082)	0.212 (0.083)
1003	0	BNL	0.888 (0.087)	0.713 (0.208)	0.972 (0.019)	0.860 (0.075)	0.060 (0.050)
1003	0	BNLR	0.763 (0.07)	0.286 (0.116)	0.969 (0.008)	0.762 (0.06)	0.105 (0.056)
1003	0	CPH-L1	0.631 (0.051)	0.288 (0.106)	0.974 (0.009)	0.760 (0.073)	0.090 (0.054)
1003	0	AFT-BVS	0.825 (0.121)	0.578 (0.261)	0.974 (0.012)	0.830 (0.086)	0.072 (0.061)
1003	30	BNL	0.851 (0.066)	0.407 (0.152)	0.966 (0.005)	0.773 (0.065)	0.186 (0.076)
1003	30	BNLR	0.688 (0.054)	0.208 (0.091)	0.961 (0.007)	0.736 (0.062)	0.185 (0.064)
1003	30	CPH-L1	0.583 (0.042)	0.188 (0.088)	0.978 (0.009)	0.742 (0.064)	0.167 (0.069)
1003	30	AFT-BVS	0.681 (0.069)	0.274 (0.111)	0.964 (0.007)	0.749 (0.068)	0.183 (0.080)
1003	50	BNL	0.818 (0.067)	0.375 (0.141)	0.970 (0.006)	0.750 (0.068)	0.255 (0.110)
1003	50	BNLR	0.651 (0.062)	0.203 (0.078)	0.961 (0.006)	0.724 (0.073)	0.268 (0.109)
1003	50	CPH-L1	0.561 (0.039)	0.142 (0.084)	0.980 (0.009)	0.712 (0.094)	0.205 (0.094)
1003	50	AFT-BVS	0.626 (0.052)	0.147 (0.072)	0.962 (0.006)	0.707 (0.083)	0.250 (0.110)