Table 3.

Percentages of genotypes called correctly by findhap for simulated sequenced animals

Error rate (%)	Population size	Sequence read depth
		1×	2×	4×	8×	16×
0	500	92.1	94.9	97.7	99.5	100.0
	1000	94.6	96.4	98.3	99.7	100.0
1	500	91.2	94.1	97.0	99.2	99.9
	1000	93.8	95.9	97.8	99.5	99.9
4	500	90.5	93.1	96.1	98.4	99.7
	1000	93.6	95.2	97.2	98.9	99.8
16	500	87.3	89.2	91.6	95.2	98.1
	1000	91.3	92.1	93.6	96.5	98.8