Table 4.
Test on PREFAB database.
| Method | All (1682/23.0) | Set 1 (420/6.8) | Set 2 (421/14.9) | Set 3 (420/23.1) | Set 4 (421/48.4) |
|---|---|---|---|---|---|
| PROMALS | 80.3 | 56.7 | 80.2 | 90.0 | 94.2 |
| SFESA (O)+PROMALS | 80.4 | 57.4 | 80.5 | 89.9 | 93.8 |
| SFESA (O+G)+PROMALS | 80.1 | 57.6 | 80.3 | 89.4 | 93.2 |
| SFESA (O+G+M)+PROMALS | 80.3 | 57.3 | 81.1 | 89.7 | 93.1 |
| SFESA (O+G+M+S)+PROMALS | 81.3 | 58.7 | 81.7 | 90.5 | 94.1 |
| HHpred | 78.0 | 46.6 | 80.2 | 90.3 | 94.7 |
| SFESA (O)+HHpred | 78.0 | 46.7 | 80.2 | 90.3 | 94.7 |
| SFESA (O+G)+HHpred | 78.3 | 47.2 | 80.6 | 90.5 | 94.9 |
| SFESA (O+G+M)+HHpred | 78.6 | 47.8 | 81.3 | 90.6 | 94.8 |
| SFESA (O+G+M+S)+HHpred | 78.6 | 47.7 | 81.1 | 90.6 | 94.9 |
| CNFpred | 80.5 | 56.3 | 81.7 | 89.6 | 94.5 |
| SFESA (O)+CNFpred | 81.0 | 57.1 | 82.1 | 90.2 | 94.6 |
| SFESA (O+G)+CNFpred | 81.2 | 57.3 | 82.3 | 90.3 | 94.7 |
| SFESA (O+G+M)+CNFpred | 81.2 | 57.2 | 82.8 | 90.3 | 94.6 |
| SFESA (O+G+M+S)+CNFpred | 81.3 | 57.5 | 82.8 | 90.4 | 94.6 |
Average Q-score is reported. The total 1682 PREFAB alignments are divided to four semi-equalsized sets according to sequence identity of the PROMALS alignment. The number of alignments and the average sequence identity are in parenthesis beneath the set names. Bold indicates the best performance in the subsection. Bold with underscore indicates the overall best performance in one column.