Skip to main content
. 2015 Jul 16;16(1):526. doi: 10.1186/s12864-015-1752-5

Table 2.

Summary of sequences used in analyses from all communities

USA AU DK
# (%) of contigs retained 7,610 (47.96 %) 7,331 (65.52 %) 18,024 (6.69 %)
# (%) of ORFs retained 22,894 (66.06 %) 25,003 (81.15 %) 30,516 (10.14 %)
# enzymes in energy pathways (%) of annotated enzymes 645 (22.13 %) 714 (22.60 %) 524 (22.40 %)

Number of retained contigs, open reading frames from retained contigs, and energy pathway related enzymes (butanoate metabolism, citric acid cycle, glycolysis and gluconeogenesis, nitrogen metabolism, pentose phosphate pathway, and propanoate metabolism) from open reading frames annotated as enzymes. Contigs at least 1000 nucleotides in length were retained