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. 2015 Jul 15;10(7):e0132581. doi: 10.1371/journal.pone.0132581

Fig 2. Phylogenetic tree and distribution of Mycobacterium tuberculosis lineages by site of disease.

Fig 2

SIT = shared international type. H3= Haarlem, CAS= Central-Asian strain, LAM= Latin American and Mediterranean **= according to [29], Completely empty MIRU-VNTR or Spoligotype pattern = not done or uninterpretable, partial empty MIRU-VNTR= non-amplified allele. PID= Patient unique Identification Number, Shaded PID = blood isolates and un-shaded PID= sputum isolates, *=Mixed alleles at a given locus, MIRU-VNTR= Mycobacterial Interspersed Repetitive Unit-Variable-Number Tandem Repeat.