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. 2015 Jul 15;10(7):e0132969. doi: 10.1371/journal.pone.0132969

Table 11. Top up-and down-regulated DEGs in the Wat6 sample.

Gene ID Reads RPKM Log2 P-value FDR Nr references Functional description
Vr39448 973 53.6 NA 0 0 XP_004500339.1 cationic peroxidase 1-like
Vr39180 6952 155 12.05 1.6E-15 1.3E-14 XP_003538325.1 cationic peroxidase 1-like
Vr41762 1370 16.4 10.71 2.2E-16 2E-15 XP_003556683.1 polygalacturonase-like
Vr22610 7681 140 9.50 0 0 XP_003544327.1 cationic peroxidase 1-like
Vr49226 1028 11.5 8.71 0 0 XP_003525322.1 cytochrome P450 716B2-like
Vr39039 10890 210 8.00 6.2E-14 4.9E-13 ADX66343.1 pathogenesis-related protein
Vr50416 1313 13.3 7.06 0 0 XP_003548705.1 D-inositol-3-phosphate glycosyltransferase-like
Vr49784 1553 35.1 6.72 1.3E-14 1.1E-13 XP_003543377.1 cysteine-rich repeat secretory protein 38
Vr40472 7732 106 6.44 0 0 CAA61279.1 basic chitinase class 3
Vr36526 10690 486 6.23 5.8E-13 4.4E-12 ABS70717.1 pathogen-related protein
Vr36176 5444 63.3 6.13 0 0 XP_003529158.1 leucoanthocyanidin dioxygenase-like
Vr13687 4326 32.1 6.10 0 0 XP_003531311.1 low affinity cationic amino acid transporter 2-like
Vr35851 43774 752 6.02 0 0 NP_001237786.1 Kunitz trypsin protease inhibitor precursor
Vr36323 1573 17 5.78 4.5E-14 3.6E-13 XP_003552581.1 anthocyanin 5-aromatic acyltransferase-like
Vr39225 5616 104 5.69 6.4E-13 4.9E-12 XP_003534655.1 cationic peroxidase 1-like
Vr21159 1088 15.1 5.57 5.9E-14 4.7E-13 ABN08535.1 auxin efflux carrier
Vr41271 2487 38.4 5.53 0 0 ACM89628.1 TIR-NBS-LRR type disease resistance protein
Vr41972 3151 43.1 5.37 0 0 XP_003536550.1 thiazole biosynthetic enzyme, chloroplastic-like
Vr28474 1074 8.72 5.36 4.9E-14 3.9E-13 XP_003543367.1 equilibrative nucleoside transporter 3-like
Vr31128 12075 169 5.33 4.7E-12 3.3E-11 XP_003547616.1 cationic peroxidase 2-like
Vr31555 1542 14.9 5.30 9.5E-14 7.5E-13 XP_003521608.1 sex determination protein tasselseed-2-like
Vr38993 15083 141 5.18 9.5E-12 6.4E-11 NP_001240000.1 isoflavone 2'-hydroxylase-like
Vr39339 6519 80.2 5.13 7.2E-13 5.4E-12 NP_001236520.1 vestitone reductase
Vr42500 4293 44.5 5.07 1.3E-12 9.8E-12 XP_003547675.1 lysine histidine transporter 1-like
Vr35207 18340 258 5.07 1.6E-11 1.1E-10 XP_003537598.1 isoflavone reductase-like
Vr38043 12585 19.59 -10.33 0 0 ACE95704.1 polyprotein precursor
Vr24590 2030 13.88 -5.89 0 0 XP_003535586.1 S-type anion channel SLAH3-like
Vr40489 13321 223.86 -5.77 0 0 NP_001236400.1 MYB transcription factor MYB114
Vr39799 21964 249.38 -5.57 0 0 ABH02878.1 MYB transcription factor MYB134
Vr13836 4622 75.72 -5.49 0 0 ABH02918.1 MYB transcription factor MYB114
Vr55469 3578 27.63 -5.31 0 0 XP_003537193.1 auxin-induced protein 5NG4-like isoform 1