TABLE 5.
Summary of the per-residue theoretical interaction energies (kcal/mol) (MM-GBSA) for 7 at neutral and slightly acidic pH conditions for residues in the 44RKNR47 motif and other key residues (those that contribute more than 1.5 kcal/mol to the interaction energy)
Key differences in energetic contributions to binding, at neutral and slightly acidic pH, are highlighted in bold/italics.
| Neutral pH | Slightly acidic pH | |
|---|---|---|
| kcal/mol | kcal/mol | |
| 44RKNR47 A | −27.9 | −27.8 |
| 44RKNR47 B | −26.6 | −40.6 |
| N terminus A | −12.5 | −14.8 |
| N terminus B | −2.9 | −5.8 |
| Arg-47 A | −8.3 | −14.0 |
| Arg-47 B | −14.0 | −16.1 |
| Arg-17 A | −1.9 | −1.9 |
| Arg-17 B | −13.9 | −12.4 |
| His-23 A | −0.9 | −5.9 |
| His-23 B | −2.2 | −8.7 |
| Chain A | −52.3 | −56.7 |
| Chain B | −50.5 | −73.4 |
| Total MM-GBSAa | −135.2 | −182.2 |
a Total from both monomers, conformational entropic effects not included.