Table 1.
Selected peptide sequences and example of human proteins containing the homologous motif
| Peptide sequence | Frequency | Homologous motif | Example of homologous proteins | Accession number |
|---|---|---|---|---|
| Coronary | ||||
| CRKRLDRNC | 8/27(30%) | 84KRLDRN89 | IL-4 | P05112 |
| CMNPKKQRC | 4/27(15%) | 762 MNPK 765 | Integrin β2 precursor | P05107 |
| CRSTKSSAC | 2/27(7.5%) | 68TKSSA72 | Thrombospondin-4 precursor | P35443 |
| Femoral | ||||
| CPSNGKRDC | 2/27(7.5%) | 177 NGKRD 181 | MMP-16 | P51512 |
| CRQGGKRDC | 1/27(3.8%) | |||
| CRTTRSKTC | 1/27(3.8%) | 266RTTSTKT272 | Scavenger receptor class A member 3 | P35443 |
| CRTTQSNTC | 1/27(3.8%) | |||
| CFSEVD | 2/27(7.5%) | 367FSEVD371 | Toll-like receptor 4 precursor | 000206 |
| CMHSEVD | 1/27(3.8%) | |||
| CLIGEVD | 1/27(3.8%) | |||
Peptides were analysed using the NCBI BLAST search against the SWISSPROT database, using the option for short nearly exact matches, to identify proteins with homologous motifs. Underlined letters represent shared motifs among the selected peptides. Frequency = (number of the peptide with the same sequence/total number of peptides). Numbers in parenthesis represent frequency in percentage.