Table 7.

Significantly depleted human TFs for the downregulated genes in the EMT process. The depleted transcription factors (TFs) were inferred by comparing ChIP-Seq or ChIP-chip identified target genes (TGs) of each TF with the downregulated genes in the EMT process. The depleted TFs were sorted according to the depleted fold ratios

Human TFs	PMID	# total TGs	# DETGs	Fold ratio	corrected P-value	Cell Lines
GABP	17652178	655	16	3.5	2.8E-09	JURKAT
KDM6A	18722178	410	14	2.5	2.2E-03	U937_AND_SAOS2
ETS1	20019798	1446	59	2.1	3.3E-10	JURKAT
EST1	17652178	636	28	2	3.3E-03	JURKAT
GABP	19822575	2430	132	1.6	4.4E-08	HepG2

PMID pubmed article number; # total TGs number of ChIP-Seq or ChIP-chip identified target genes (TGs) of each TF; #DETGs number of differentially expressed genes