Table 1.
Sequences with more than 1,000 reads after assembly.
| Sequence | N° reads | Description | Protein | Species | E-value | Abiotic or biotic |
|---|---|---|---|---|---|---|
| isotig08529 | 19,048 | Senescence-associated protein | XP_003614399 | Medicago truncatula | 2.77E-20 | |
| isotig13329 | 15,020 | Metallothionein-like protein type 2 | XP_002299873 | Populus trichocarpa | 1.47E-10 | |
| isotig07130 | 2,395 | Pectin methylesterase 5 family protein | XP_002304257 | P. trichocarpa | 2.71E-156 | Biotic |
| isotig13408 | 2,265 | No hits found | – | – | ||
| isotig21287 | 1,951 | Hypothetical protein | XP_002865071 | Arabidopsis lyrata | 8.24E-07 | Abiotic |
| isotig13084 | 1,832 | Kda class i heat shock protein | XP_002298362 | P. trichocarpa | 6.40E-20 | Abiotic |
| isotig13342 | 1,766 | No hits found_Rejected SeqTrim | – | |||
| isotig02731 | 1,686 | Chlorophyll a–b binding protein | XP_004248217 | Solanum lycopersicum | 2.03E-139 | Abiotic |
| isotig21296 | 1,605 | 60s ribosomal protein l29-1 | XP_002519200 | Ricinus communis | 4.85E-32 | |
| contig07984 | 1,478 | Mitochondrial protein, putative | XP_003588355 | M. truncatula | 1.37E-76 | |
| contig06910 | 1,475 | No hits found | – | – | ||
| contig23572 | 1,426 | Phosphoprotein ecpp44-like | XP_004238411 | S. lycopersicum | 4.71E-08 | Abiotic |
| isotig07047 | 1,402 | Bifunctional epoxide hydrolase 2-like | XP_003550367 | Glycine max | 1.34E-44 | |
| contig22192 | 1,301 | Catalase isozyme 1 | NP_001268098 | Vitis vinifera | 0 | Abiotic and biotic |
| isotig03470 | 1,270 | Galactinol synthase family protein | XP_002265947 | V. vinifera | 0 | Abiotic |
| isotig20888 | 1,156 | Kda class i heat shock protein | XP_002530396 | R. communis | 2.69E-61 | Abiotic |
| isotig13264 | 1,149 | Plastocyanin family protein | XP_002510603 | R. communis | 5.77E-74 | Abiotic |
| contig09765 | 1,120 | Kda class i heat shock protein | XP_003618790 | M. truncatula | 1.74E-64 | Abiotic |
| isotig18771 | 1,046 | Calmodulin-like | XP_006378996 | P. trichocarpa | 2.84E-100 | Abiotic |
| isotig02650 | 1,014 | Thioredoxin h2-like | XP_008361428 | Malus domestica | 1.66E-58 | Abiotic and biotic |
| contig07917 | 1,005 | 40s ribosomal protein s4 | XP_002515668 | R. communis | 8.65E-166 |
For each sequence the information shown is: the number of reads, protein description, best blast hit including accession number of protein from RefSeq database, species and E-value, and information relative to annotation when sequences were associated to response to abiotic or biotic stimulus.