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. 2015 Jul 21;8:25. doi: 10.1186/s13072-015-0017-5

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© Wallerman et al. 2015

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Relplicate analysis. a FOXA2 read counts at peak locations for two technical replicates. b Scatter plot comparing reads at TSS for two lobChIP technical replicates for H3K4me3. c H3K27ac results for automated and manual lobChIP at TSS. Read counts on x- and y-axis are normalized to sequencing depth. d Five replicates for NRF1, with replicate 2–4 (blue bar) from the same chromatin preparation. The number of peaks is given on the diagonal with correlation coefficients for enrichment below. e Four-way venn diagram for genes with NRF1 peaks, with merged results for the three NRF1 samples made from the same chromatin. f Overlap of TCF7L2 peaks identified in ENCODE, SOLiD lobChIP and standard Illumina ChIP-seq.