Table 2.
Nucleotide and Amino Acid Sequence Identity (%) Between SC0806 and Representatives of Recognized Orthobunyavirus Serogroups
| L segment | M segment | S segment | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Serogroups | Species | Virus | nt | aa | nt | aa | nt | aa (Np) | aa (NSs) |
| Simbu | Manzanilla | Cat Que virus | 92.3 | 99.1 | 97.3 | 99.1 | 85 | 100 | 100 |
| Manzanilla | TRVL 3586 | 26.9 | 89.6 | 29.2 | 78.5 | 78.6 | 96.1 | 88.4 | |
| Akabane | OBE-1 | 27.1 | 7.7 | 26.7 | 6.4 | 23.3 | 62.2 | 44.2 | |
| Oropouche | TRVL-9760 | 27.1 | 9.5 | 27.2 | 14.5 | 16.2 | 7.7 | 53.6 | |
| Sathuperi | Sathuperi virus | 27.2 | 7.6 | 26.3 | 5.5 | 22.5 | 61.8 | 42.1 | |
| Simbu | SA Ar 53 | 27.4 | 7.3 | 27 | 5.8 | 23.7 | 64.3 | 48.4 | |
| Shamonda | An5550 | 26.4 | 7.6 | 27.8 | 6.4 | 23.5 | 61.8 | 44.2 | |
| Shuni | An10107 | 26 | 26 | 26.7 | 6.5 | 22 | 64.8 | 46.3 | |
| Bunyamwera | Bunyamwera | Bunyamwera virus | 28.4 | 7.8 | 27.6 | 8.7 | 25.7 | 23.6 | 9.9 |
| California encephalitis | California encephalitis | La Crosse virus | 26.8 | 8.1 | 27.5 | 6.6 | 28.8 | 10.2 | 10.3 |
| Wyeomyia | Wyeomyia | Wyeomyia virus | 28.3 | 7.3 | 27.7 | 6.4 | 26.7 | 23.8 | 10.5 |
Note: GenBank accession numbers used: SC0806, JX983192–JX983194; Cat Que virus, JQ675598–JQ675600; TRVL 3586, KF697148-KF697150; OBE-1, NC009894–NC009896; TRVL-9760, KC759122–KC759124; Sathuperi virus, HE795102–HE795104; SA Ar 53, NC018476–NC018478; An5550, HE795105–HE795107; An10107, HE800141–HE800143; Bunyamwera virus, NC001925–NC001927; La Crosse virus, GU206144–GU206146; Wyeomyia virus, JN572080-JN572082.
L segment, large RNA segment; M, segment, medium RNA segment; S segment, small RNA segment; nt, nucleotides; aa, amino acids; Np, nucleoprotein; NSs, nonstructural protein.