Table 1.

Putative antisense genes controlled by CPC, ETC1 and TRY

Antisense gene	Overlaps with	Description	Fold-change
etc1 Pi-replete
At2g35738	At2g35740	INOSITOL TRANSPORTER 3 (INT3)	0.52
etc1 low Pi
At1g74205	At1g74210	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 5 (GDPD5)	1.69
At4g26795	At4g26790	GDSL-like lipase/acylhydrolase superfamily protein	2.18
At1g60505	At1g60510	DYNAMIN RELATED PROTEIN 4D (DRP4D)	1.90
cpc Pi-replete
At1g72852	At1g72850	Disease resistance protein	0.42
At1g67365	At1g67370	ASYNAPTIC 1 (ASY1)	0.33
At2g35738	At2g35740	INOSITOL TRANSPORTER 3 (INT3)	0.35
At5g07152	At5g07150	Leucine-rich repeat protein kinase family protein	2.42
cpc low Pi
At4g27852	At4g27850; At4g27860	Glycine-rich protein family; MEMBRANE OF ER BODY 1 (MEB1)	0.35
At1g03545	At1g03550	SECRETORY CARRIER MEMBRANE PROTEIN 4 (SCAMP4)	2.98
At1g07128	At1g07130	STN1	0.18
At3g22072	At3g22070	Proline-rich family protein	∞
At1g28685	At1g28680	HXXXD-type acyl-transferase family protein	0.14
At3g21755	At3g21760	HYPOSTATIN RESISTANCE 1 (HYR1)	7.12
At3g48115	At3g48120	Unknown protein	0.56
At2g22821	At2g22820	Unknown protein	0.22
try low Pi
At1g60505	At1g60510	DYNAMIN RELATED PROTEIN 4D (DRP4D)	1.88
At4g26795	At4g26790	GDSL-like lipase/acylhydrolase superfamily protein	2.99
At4g31398	At4g31400	CHROMOSOME TRANSMISSION FIDELITY 7 (CTF7)	0.14
At3g21755	At3g21760	HYPOSTATIN RESISTANCE 1 (HYR1)	5.46
At4g13700	At1g44120	CELLULOSE SYNTHASE INTERACTIVE 2 (CSI2)	1.60
At1g56165	At1g56160	MYB72	0.35
try Pi-replete
At2g46572	At2g46570	LACCASE 6 (LAC6)	2.62
At3g24518	At3g24520	HEAT SHOCK TRANSCRIPTION FACTOR C1 (HSFC1)	0.40
At5g01175	At5g01180	PEPTIDE TRANSPORTER 5 (PTR5)	1.59
At1g28685	At1g28680	HXXXD-type acyl-transferase family protein	0.38
At2g35738	At2g35740	INOSITOL TRANSPORTER 3 (INT3)	0.49
At2g35637	At2g35640	Homeodomain-like superfamily protein	0.43
At1g60525	At1g60530	DYNAMIN RELATED PROTEIN 4A (DRP4D)	1.61