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. 2015 Jul 21;81(16):5318–5325. doi: 10.1128/AEM.01151-15

TABLE 2.

Primers and annealing temperature used for MLVA

Locus Primer Primer sequence (5′-3′) Annealing temp (°C)
V2 V2F CATCACTTCCTTGTTAAG 50
V2R CAATGTCCGTGATTATACA
V6 V6F GCAAGCTCATCAAGACTTT 55
V6R CTTTCYACCTCATTGCTATAA
V11 V11F ATGYCCTATGGTTCTACTTAG 55
V11R GCAGGCTTTGCCACT
V13 V13F TCAAGTAGAGTTTGTATTAGAACTTG 55
V13R TAACAATGTCCGTGATTATACA
V17 V17F CTCGTATTTATCCGCC 50
V17R TCATCTAACTCTTGACGC
V19 V19F TCCAAAAGGTTAAAAGCCT 55
V19R TGAAACGCATTATCTTACTATCTAG
V33 V33F TCAAACCAAGGATATTGTAATAAT 55
V33R CTGCTGATAATTTACCAAATGT