. 2010 Oct 28;3:29–56. doi: 10.4137/GEI.S4340

Table S1.

ESTs that tag for enzymatic functions putatively involved in the metabolism of saturated fatty acid of J. curcas.

Pathway	EST	Reads/contig	KEGG homolog	Definition	EC	Map	Sz¹	Homol²	Id%³
Fatty acid biosynthesis (00061)
	^*Contig376	FM891097, FM892258, FM891175, FM893271, FM892235, FM893697	rcu:RCOM_1431360	Short chain dehydrogenase	1.1.1.100	1040, 61	293	181	88
	Contig397	FM893767, FM891233	rcu:RCOM_0925410	Palmitoyl-acyl carrier protein thioesterase	3.1.2.14	61	419	106	90
	^*Contig895	FM896100, FM888313, FM889937	rcu:RCOM_0251360	Ketoacyl-ACP Synthase III	2.3.1.41	61	400	158	91
	Contig1093	GH295922, FM888387, GH296315	rcu:RCOM_0633300	Ketoavyl-ACP synthase	2.3.1.41	61	469	78	78
	FM887191		rcu:RCOM_0633300	50 kDa ketoavyl-ACP synthase	2.3.1.41	61	469	97	73
	FM887714		rcu:RCOM_1403260	Malonyl-CoA : ACP acyltransferase	2.3.1.39	61	400	124	75
	FM888027		rcu:RCOM_0710230	46 kDa ketoavyl-ACP synthase	2.3.1.41	61	554	52	98
	FM889551		rcu:RCOM_1636080	2,4-dienoyl-CoA reductase	1.1.1.100	1040, 61	285	109	88
	FM891538		rcu:RCOM_1431360	Short chain dehydrogenase	1.1.1.100	1040, 61	293	56	80
	FM895510		rcu:RCOM_0097860	Enoyl-ACP reductase precursor	1.3.1.9	61	359	121	76
	FM895824		pop:POPTR_555276	Enoyl-[acyl-carrier protein reductase	1.3.1.9	61	394	162	82
	GO247153		olu:OSTLU_12103	3-oxoacyl-[acyl-carrier protein reductase	1.1.1.100	1040, 61	273	44	77
	GT228627		rcu:RCOM_1081890	Ketoacyl-ACP Reductase	1.1.1.100	1040, 61	328	188	75
Fatty acid elongation in mitochondria (00062)
	Contig332	FM890615, FM896803, FM892730	ath:AT3G06860	Multifunctional protein MFP2	1.1.1.211	1070, 71, 1040, 62	725	258	84
	FM892914		ec00062	3-ketoacyl-CoA thiolase B	2.3.1.16	1070, 71, 592, 1040, 62	460	88	90
	GT229218		rcu:RCOM_0696050	Enoyl-CoA hydratase, mitochondrial precursor	4.2.1.17	1070, 71, 592, 1040, 62	389	195	78
Fatty acid metabolism (00071)
	Contig332	FM890615, FM896803, FM892730	ath:AT3G06860	Multifunctional protein MFP2	1.1.1.211	1070, 71, 1040, 62	725	258	84
	^*Contig433	FM891676, FM891199	rcu:RCOM_0914000	Acyl-CoA synthetase	6.2.1.3	71	694	74	78
	^*Contig516	FM892437, FM890803, FM892732, GO247603, FM893815, FM891552	npu:Npun_F3727	Ferredoxin 2Fe-2S	1.18.1.3	71	99	96	68
	Contig1015	GH295632, GH295820, GH296400, GH296214, GH295687, GH296081, GH296508, GH296024, GH295630,GH295630, GH296026, GH295757, GH296151	pmj:P9211_14071	Ferredoxin	1.18.1.3	71	99	98	61
	^*Contig1435	GT229265, GO247630, FM894566, FM890476, GO247018, FM889828	dre:436918	Dodecenoyl-CoA delta-isomerase	5.3.3.8	71	357	68	47
	FM888666		rcu:RCOM_1032290	Long-chain-fatty-acid CoA ligase	6.2.1.3	71	697	127	83
	FM892914		rcu:RCOM_1020840	3-ketoacyl-CoA thiolase B	2.3.1.16	1070, 71, 592, 1040, 62	460	88	90
	FM894424		rcu:RCOM_1437260	Cytochrome P450	1.14.14.1	1063	632	180	86
	FM894637		vvi:100257352	Glutaryl-CoA dehydrogenase	1.3.99.7	71	446	155	89
	FM894979		pop:POPTR_832274	Acyl-CoA oxidase	1.3.3.6	1070, 71, 592, 1040	689	196	92
	GO247595		dre:436918	Dodecenoyl-CoA delta-isomerase	5.3.3.8	71	357	68	47
	GT229218		rcu:RCOM_0696050	Enoyl-CoA hydratase, mitochondrial precursor	4.2.1.17	1070, 71, 592, 1040, 62	389	195	78

Notes:

Sz is for the size of the KEGG homologous protein in amino acids;

Homol is for the size of the homologous region in amino acids;

Id% is for the pourcentage of identity of amino acid homologous pairs;

A contig with an asterisk in front means that its reads show nucleotide polymorphism.