Table 3. High risk Human Papillomavirus types per hot-spot mutation and per histological subtype.
Gene | Mutation | SCC | AC | ASC |
---|---|---|---|---|
PIK3CA, n = 61 (20%) | p.E545K, n = 40 | negative (2) | 16 | 16 (4) |
16 (15) | 18 (2) | 18 | ||
18 (4) | 31 | |||
45 | 33 | |||
51 | 16+68 | |||
52 | ||||
73 | ||||
16+31 | ||||
16+68+73 | ||||
18+45 | ||||
51+52 | ||||
p.E542K, n = 17 | 16 (8) | 16 (2) | 16 (3) | |
18 | 31 | |||
31 | ||||
52 | ||||
p.H1047R, n = 4 | 31 | 18 | 51 | |
33 | ||||
p.R88Q, n = 1 | negative | |||
KRAS, n = 20 (7%) | p.G12D, n = 10 | 16 | negative (2) | 18 (2) |
52 | 16 (3) | |||
18 | ||||
p.G13S, n = 4 | 16 (3) | |||
18 | ||||
p.G12V, n = 3 | negative | 18 | ||
16 | ||||
p.G12C, n = 1 | 16 | |||
p.G12A, n = 1 | 16 | |||
p.G12S, n = 1 | 18 | |||
PTEN, n = 12 (4%) | p.R130G, n = 3 | negative | negative (2) | |
p.Q214*, n = 2 | negative | 16 | ||
p.R234W, n = 2 | negative | 16 | ||
p.R130*, n = 1 | 16 | |||
p.R130fs*4, n = 1 | 18 | |||
p.R173H, n = 1 | 16 | |||
p.K267fs*31, n = 1 | 16+18 | |||
p.K267fs*9, n = 1 | 16 | |||
PPP2R1A, n = 9 (3%) | p.R258H, n = 6 | 16 | 16 | 16 |
16+52 | 18 | |||
31 | ||||
p.P179R, n = 3 | 16 | 18 | ||
33 | ||||
p.R183W, n = 1 | 16 | |||
CTNNB1, n = 8 (3%) | p.G34R, n = 3 | 16 | 16 | |
45 | ||||
p.D32N, n = 1 | 16 | |||
p.S37F, n = 1 | 16 | |||
p.S45F, n = 1 | negative | |||
p.T41A, n = 1 | 33 | |||
p.T41I, n = 1 | 16 | |||
CDKN2A, n = 4 (1%) | p.R58*, n = 2 | negative | 45 | |
p.P114L, n = 1 | 16 | |||
p.W110*, n = 1 | 16 | |||
FBXW7, n = 3 (1%) | p.R465H, n = 2 | negative | ||
16 | ||||
p.R465C, n = 1 | 18 | |||
FGFR3, n = 2 (1%) | p.S249C, n = 2 | negative | 16 | |
HRAS, n = 1 (<1%) | p.G12D, n = 1 | 16+33 | ||
NRAS, n = 1 (<1%) | p.Q61R, n = 1 | 16 |
SCC, squamous cell carcinoma; AC, adenocarcinoma; ASC, adenosquamous carcinoma. When more than one tumor with the same mutation and same HPV type was detected, the number is given between brackets. Seven tumors were double positive, one tumor was triple positive, shown with"+".