Table 2.
Project information
| MIGS ID | Property | Term/Strains | |||||
|---|---|---|---|---|---|---|---|
| S1 | S12 | S17 | S18 | S19 | S32 | ||
| MIGS-31 | Finishing quality | High-quality draft | |||||
| MIGS-28 | Libraries used | One paired-end Illumina library | |||||
| MIGS-29 | Sequencing platforms | Illumina Miseq | |||||
| MIGS-31.2 | Fold coverage | 156 | 162 | 240 | 84 | 172 | 200 |
| MIGS-30 | Assemblers | Velvet version 1.1.04 | |||||
| MIGS-32 | Gene calling method | Glimmer 3.0 | |||||
| Genbank ID | JTKS00000000 | JTKT00000000 | JTKU00000000 | JTKV00000000 | JTKW00000000 | JTKX00000000 | |
| Genbank Date of Release | 2014/12/02 | ||||||
| Bioproject | PRJNA267758 | PRJNA268957 | PRJNA268240 | PRJNA268137 | PRJNA267759 | PRJNA268241 | |
| Project relevance | Environmental | ||||||
| MIGS-13 | Source Material Identifier | Strain: 1 | Strain: 12 | Strain: 17 | Strain: 18 | Strain: 19 | Strain: 32 |
| Project relevance | Environment, bacteria isolated from copper fed pigs | ||||||
Copper resistant strains are marked in red (S1, S18 and S32)