Table 4.
Results of annotation-oriented evaluation on Gene-expression and Localization. Acronyms: GS=gold standard, P=positives, TP=true positives, R=recall, P=precision, F=f-score.
Gene_expression | Localization | |||||
---|---|---|---|---|---|---|
P | TP | R / P / F | P | TP | R / P / F | |
GS | 619 | 619 | 99 | 99 | - | |
EVEX | 600 | 504 | 81.42 / 84.00 / 82.69 | 56 | 47 | 47.47 / 83.93 / 60.65 |
TEES-2.1 | 600 | 504 | 81.42 / 84.00 / 82.69 | 59 | 50 | 50.51 / 84.75 / 63.29 |
BioSEM | 526 | 457 | 73.83 / 86.88 / 79.83 | 47 | 42 | 42.42 / 89.36 / 57.53 |
NCBI | 641 | 495 | 79.97 / 77.22 / 78.57 | 47 | 39 | 39.39 / 82.98 / 53.42 |
DlutNLP | 580 | 480 | 77.54 / 82.76 / 80.07 | 39 | 35 | 35.35 / 89.74 / 50.72 |
HDS4NLP | 556 | 501 | 80.94 / 90.11 / 85.28 | 66 | 50 | 50.51 / 75.76 / 60.61 |
NICTANLM | 761 | 506 | 81.74 / 66.49 / 73.33 | 52 | 31 | 31.31 / 59.62 / 41.06 |
USheff | 450 | 386 | 62.36 / 85.78 / 72.22 | 27 | 23 | 23.23 / 85.19 / 36.51 |
UZH | 497 | 406 | 65.59 / 81.69 / 72.76 | 39 | 34 | 34.34 / 87.18 / 49.28 |
HCMUS | 790 | 488 | 78.84 / 61.77 / 69.27 | 61 | 32 | 32.32 / 52.46 / 40.00 |