Table 1.
Classification and general features of Pontibacter roseus SRC-1T according to the MIGS recommendations [4], published by the Genomic Standards Consortium [5]
| MIGS ID | Property | Term | Evidence code |
|---|---|---|---|
| Domain Bacteria | TAS [6] | ||
| Phylum Bacteroidetes | TAS [7,8] | ||
| Class Cytophagia | TAS [8,9] | ||
| Current classification | Order Cytophagales | TAS [10,11] | |
| Family Cytophagaceae | TAS [10,12] | ||
| Genus Pontibacter | TAS [2,3,10] | ||
| Species Pontibacter roseus | TAS [2,3,10] | ||
| Strain | SRC-1T | TAS [2,3,10] | |
| Gram stain | Gram-negative | TAS [2] | |
| Cell shape | Irregular rods | TAS [2] | |
| Motility | Non-motile | TAS [2] | |
| Sporulation | Non-sporulating | TAS [2] | |
| Temperature range | 4–37°C | TAS [2] | |
| Optimum temperature | 30°C | TAS [2] | |
| Salinity | Halotolerant | TAS [2] | |
| Relationship to oxygen | Obligate aerobe | TAS [2] | |
| Carbon source | Sugars (Glucose, Galactose etc.) | TAS [2] | |
| TAS [2] | |||
| MIGS-6 | Habitat | Wastewater, aquatic | TAS [2] |
| MIGS-6.2 | pH | pH 6.0–10.0 | TAS [2] |
| MIGS-15 | Biotic relationship | Free living | NAS |
| MIGS-14 | Known pathogenicity | Not reported | |
| Biosafety level | 1 | NAS | |
| MIGS-23 | Isolation | Muddy water | TAS [2] |
| MIGS-4 | Geographic location | Chandigarh, India | TAS [2] |
| MIGS-5 | Time of sample collection | Before 2006 | TAS [2] |
| MIGS-4.1 | Latitude | 30.733 | TAS [2] |
| MIGS-4.2 | Longitude | 76.779 | TAS [2] |
Evidence codes – TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence); Evidence codes are from the Gene Ontology project [13].