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. 2015 Jun 24;2(3):ofv093. doi: 10.1093/ofid/ofv093

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© The Author 2015. Published by Oxford University Press on behalf of the Infectious Diseases Society of America.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.

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Figure 4. — Heat map of RNA-Seq transcriptome analysis for 52 selected genes from the Staphylococcus aureus Complicated Infection Group (CIG). The heat map shows log₁₀ fragments per kilobase per million reads mapped (FPKM) values for 52 selected genes indicated by tick marks in Figure 3 (rows) and 32 samples (columns). Color corresponds to per-gene z-score that is computed from log₁₀ FPKM (after adding 0.01). Genes and samples were hierarchically clustered based on Jensen-Shannon divergence distance using non-log FPKM data (after adding 1) and average linkage (dendrogram not shown for genes). Abbreviation: CC, clonal complex.