Table 1.
Methicillin-Resistant Staphylococcus aureus Strains in the CIG
| IDa | Clonal Complex | Group | B&J | Endo | Both | Outcomeb | Proportionc |
|---|---|---|---|---|---|---|---|
| 1057 | 5 | Complicated | X | 1 | 1 | ||
| 1096 | 5 | Complicated | X | 2 | 0.9 | ||
| 1150 | 5 | Complicated | X | 1 | 0.364 | ||
| 1165 | 5 | Complicated | X | 3 | 0.92 | ||
| 1213 | 5 | Complicated | X | 3 | 0.92 | ||
| 1750 | 5 | Complicated | X | 3 | 1 | ||
| 1769 | 5 | Complicated | X | 3 | 0.7 | ||
| 1612 | 8 | Complicated | X | 1 | 0.8 | ||
| 1114 | 8 | Complicated | X | 1 | 0.55 | ||
| 547 | 8 | Complicated | X | 1 | 0.86 | ||
| 2018 | 8 | Complicated | X | 1 | 0.75 | ||
| 1524 | 45 | Complicated | X | 3 | 0.3 | ||
| 290 | 45 | Complicated | X | 2 | 0.56 | ||
| 1835 | 1 | Complicated | X | 3 | 0.88 | ||
| 1176 | 30 | Complicated | X | 1 | 0.93 | ||
| 1242 | 30 | Complicated | X | 1 | 0.93 | ||
| 1500 | 30 | Complicated | X | 3 | 1 | ||
| 1605 | 30 | Complicated | X | 2 | 0.92 | ||
| 1267 | 30 | Complicated | X | 1 | 1 | ||
| 1214 | 30 | Complicated | X | 3 | 0.9 | ||
| 149 | 30 | Complicated | X | 3 | 0.9 | ||
| 1233 | 30 | Complicated | X | 3 | 1 | ||
| 1770 | 8 | Complicated | X | 3 | 0.58 | ||
| C34D | 8 | Nasal carriage | 0.2 | ||||
| C34D | 5 | Nasal carriage | 0.2 | ||||
| C348 | 5 | Nasal carriage | 1 | ||||
| C34D | 30 | Nasal carriage | 1 | ||||
| C93 | 15 | Nasal carriage | 0.1 | ||||
| C128 | 1 | Nasal carriage | 0.6 |
Abbreviations: B&J, bone and joint infection; Both, both bone and joint and endocarditis; CIG, Complicated Infection Group; Endo, endocarditis; ID, identification.
a Sequence data for the CIG genomes has been deposited in GenBank under PID (Pathway Interaction Database):
b 1, cured; 2, recurrent S aureus infection; 3, death due to S aureus infection.
c Proportion of 14 potential virulence genes more frequently associated with strains causing complicated infections [14]. This value is a fraction determined by X/14, where X = the number of virulence genes in the isolate.
PRJNA60651, PRJNA60653, PRJNA60655, PRJNA60657, PRJNA60659, PRJNA60661, PRJNA60663, PRJNA60665, PRJNA60667, PRJNA60669, PRJNA60671, PRJNA60673, PRJNA60675, PRJNA60677, PRJNA60679, PRJNA60681, PRJNA60683, PRJNA60685, PRJNA60687, PRJNA60689, PRJNA60691, PRJNA60693, PRJNA60695, PRJNA60697, PRJNA60699, PRJNA60701, PRJNA60703, PRJNA60705, PRJNA60707.