Table 2. Gene ID, Ensemble ID and related Forward and Reverse primers used in qPCR.
Gene ID | Ensembl ID | Forward Primer | Reverse Primer |
---|---|---|---|
GAPDH | ENSG00000111640 | TCAACAGCGACACCCAC | GGGTCTCTCTCTTCCTCTTGTG |
ANGPTL7 | ENSG00000171819 | AGAGATGGAGGACTGGGAGG | TGGTGCTGAAGGCTGTGT |
ANKRD1 | ENSG00000148677 | TGATTATGTATGGCGCGGATCT | GGCTGTCGAATATTGCTTTGGT |
ANXA1 | ENSG00000135046 | ACGCTTTGCTTTCTCTTGCT | TGTCCCCTTTCTCCTTTCTCCT |
CASP14 | ENSG00000105141 | GGGAGAAGATGGGGAGATGG | TGGGATGGTTTGTGGGCT |
CCL2* | ENSG00000108691 | CAGCAAGTGTCCCAAAGAAGC | AGTGAGTGTTCAAGTCTTCGGA |
COL1A1 | ENSG00000108821 | GGCAAAGATGGACTCAACGG | GGGCAGGAAGCTGAAGTCGAAA |
CYP4F11 | ENSG00000171903 | GTCTACGACCCCTTCCGTTT | ACCACCTTCATCTCAGCCA |
DCN* | ENSG00000011465 | AGCTCAGGAATTGAAAATGGGG | CGTAAGGGAAGGAGGAAGACC |
NOS1 | ENSG00000089250 | ACATCACCACGCCACCAAC | TCCTCGTACTCCTGCAAACCC |
OGG1* | ENSG00000114026 | CCAAGAGGTGGCTCAGAAA | GGCGATGTTGTTGTTGGAGGAA |
PIM1 | ENSG00000137193 | GTGCTCCCACACATCAATCC | GTGCTCCCACACATCAATCC |
PTX3* | ENSG00000163661 | TGTGGGTGGTGGCTTTGATG | CGGATGTGACAAGACTCTGCTC |
SERPINE1 | ENSG00000106366 | CTCTGCCCTCACCAACAT | CGGTCATTCCCAGGTTCTC |
SFRP2 | ENSG00000145423 | GAAATCGGTGCTGTGGCT | CTTGAACTCTCTCTGCCCCT |
SOD2* | ENSG00000112096 | TTTCAATAAGGAACGGGGACAC | GTGCTCCCACACATCAATCC |
SPRR1A* | ENSG00000169474 | AATCGCTCCTTTGCACCTC | CCTTCCCCAAATCCATCCTC |
GAPDH was used as housekeeping gene, other genes were selected for RNA-seq validation (underlined) or time-related expression analysis (*)