Table 1. Age estimates of L2 and L0a clades mentioned in the text.
Clade | Bayesian relaxed clock | ML whole mtDNA | ρwhole mtDNA | ρ synonymous age |
---|---|---|---|---|
L2 | 78600 [64900–92400] | 99100 [83000–115500] | 68800 [52200–86100] | 76400 [46600–106200] |
L2a’b’c’d | 73700 [60500–87400] | 93500 [78000–109300] | 57200 [38500–76800] | 77900 [41100–114700] |
L2a | 66100 [52700–79200] | 84400 [67000–102200] | 50100 [33100–68000] | 70500 [35600–105400] |
L2a1-4 | 45500 [34800–56600] | 50700 [34700–67500] | 28300 [20600–36300] | 32400 [18500–46300] |
L2a1 | 29600 [23400–36100] | 26500 [17900–35500] | 18900 [12000–26100] | 28700 [11100–46200] |
L2a1 + 143 | 23300 [19300–28000] | 24800 [17500–32200] | 23200 [18000–28500] | 21000 [15900–26000] |
L2a1a | 8700 [6200–11000] | 6200 [3800–8800] | 5400 [3300–7600] | 5900 [2000–9800] |
L2a1a2a1a | 8100 [6300–10300] | 5300 [3200–7500] | 6800 [3200–10400] | 6600 [2500–10600] |
L2a1b | 14000 [11800–16300] | 11400 [7100–15900] | 14100 [6400–22100] | 11000 [400–21500] |
L2a1b1a | 9400 [7300–11500] | 6900 [4500–9300] | 5000 [2800–7300] | 3200 [600–5700] |
L2a1c | 17300 [14100–20500] | 17000 [12600–21500] | 17400 [13300–21500] | 18000 [12100–24000] |
L2a1d | 15300 [12200–18900] | 17600 [12200–23100] | 22200 [12300–32500] | 22400 [6200–38600] |
L2a1d1 | 9900 [6500–13800] | 10600 [5700–15700] | 15500 [7700–23500] | 19700 [4300–35200] |
L2a1d2 | 13000 [10300–16000] | 15800 [10100–21600] | 17200 [6100–28900] | 11800 [0–25500] |
L2a1d2a | 7700 [5800–10600] | 3700 [1700–5700] | 3500 [1800–5200] | 3900 [800–7100] |
L2a1e | 13300 [9400–17100] | 13300 [6700–20100] | 13400 [6100–20900] | 22300 [5800–38800] |
L2a1f | 18300 [13600–22600] | 7500 [5100–9900] | 7700 [5200–10300] | 7000 [4000–10100] |
L2a1g | 6000 [2300–10700] | 3700 [0–8600] | 3900 [0–8400] | 3900 [0–11700] |
L2a1h | 13300 [9200–17400] | 14400 [6400–22800] | 16900 [6200–28200] | 23700 [2500–44800] |
L2a1i | 11700 [8900–14000] | 9300 [5600–13100] | 9400 [5100–13800] | 9400 [2600–16100] |
L2a1j | 7600 [4500–11900] | 7000 [0–16900] | 6100 [1000–11400] | 5300 [0–12500] |
L2a1k | 8800 [4900–13500] | 9700 [3400–16300] | 10600 [3200–18400] | 7900 [0–18800] |
L2a1l | 12500 [10600–14100] | 11000 [6800–15400] | 11300 [16200–65600] | 10000 [1100–18900] |
L2a1l2a | 6600 [4400–8800] | 1500 [0–3600] | 1800 [0–4300] | — |
L2a1m | 7700 [4900–10700] | 6500 [2400–10800] | 5700 [2000–9600] | 9500 [800–18200] |
L2a1q | 6100 [3500] | 2900 [0–6800] | 1700 [0–4100] | 2600 [0–7800] |
L2a1r | 8500 [5800–11200] | 7300 [1500–13400] | 9000 [2600–15600] | 6300 [0–18700] |
L2a2'3'4 | 32300 [22600–41200] | 36500 [25200–48400] | 37100 [25400–49300] | 42800 [24200–61500] |
L2a4 | 23600 [14800–32100] | 27600 [17000–38600] | 23700 [12300–35700] | 42400 [15000–69800] |
L2a4a | 9900 [5800–14100] | 6100 [1600–10600] | 4800 [1300–8400] | 3900 [0–9700] |
L2a4b | 10700 [5600–15800] | 12500 [4500–21000] | 13400 [5000–22200] | 15800 [300–31200] |
L2a5 | 46000 [32100–59200] | 56200 [41300–71700] | 50000 [34000–66800] | 57400 [28600–86300] |
L2b’c’d | 65100 [52400–78700] | 86700 [10400–70500] | 79800 [10100–59300] | 50500 [30100–70800] |
L2b’c | 49700 [37300–61000] | 65300 [49700–81300] | 59300 [43500–75800] | 39200 [22900–55500] |
L2b | 24500 [19300–30700] | 26000 [20300–31900] | 27600 [19000–36600] | 30900 [17000–44800] |
L2b1a3 | 9800 [6900–12700] | 5500 [2900–8100] | 5200 [2400–8100] | 7200 [600–13800] |
L2b2a | 7700 [4800–10800] | 6100 [1900–10500] | 4700 [1600–7800] | 4700 [0–10100] |
L2c | 18300 [14500–22700] | 17200 [13800–20600] | 18600 [14300–23000] | 15500 [10900–20100] |
L2c2a1 | 7800 [5700–9700] | 5900 [2000–10000] | 8400 [1400–15800] | 3200 [100–6200] |
L2c2b1b | 5000 [2900–7300] | 2500 [0–5500] | 2600 [0–5600] | 2600 [0–7800] |
L2d | 16200 [12600–20400] | 19000 [13200–24900] | 16500 [9700–23500] | 18600 [7300–29800] |
L2e | 34300 [24200–44900] | 38900 [28400–49600] | 28600 [20100–37400] | 37200 [20700–53600] |
L2e1a1a | 5300 [2700–9000] | 1800 [0–4200] | 1700 [0–4100] | — |
L0a | — | 59200 [41000–78200] | 38500 [27700–49700] | 37700 [20700–54800] |
L0a1a2 | — | 10500 [7700–13400] | 7800 [5500–10100] | 6300 [4100–8500] |
L0a1b1a | — | 6700 [3600–9900] | 6300 [2000–10800] | 3600 [1300–5800] |
L0a2a2a | — | 7000 [4700–9300] | 5500 [3400–7700] | 5300 [1400–9200] |
Underlined branches are newly labelled in this study.