TABLE 4.
Predicted ORFs and features of pPMA4326D
| ORF or featurea | Position | Size (aa)b | %GC | Homology (BLAST)c | Accession no. | Score/E value; aa identity (no. with identity/total [%]) |
|---|---|---|---|---|---|---|
| D01 | 1-183 | 61 | 61 | Hypothetical | ||
| D02 | 659-237 | 141 | 62 | Hypothetical | ||
| MFD01 | 1184-1805 | 622 bp | 49 | E622 (IS-like element, no transposase); PmaES4326 | ||
| D03 | 1812-3215 | 467 | 59 | Mobilization protein; Sinorhizobium meliloti (pRm1132f) | AAG59888 | 133/3e−30; 109/389 (38) |
| D04 | 3297-3521 | 75 | 36 | Hypothetical | ||
| MFD02 | 3543-4171 | 629 bp | 58 | Replication domain; Acidithiobacillus ferrooxidans TFN (pH1) | AJ251742 | 47/2e−11; 27/56 (48); 21/28 (75) |
| D05 | 4458-4279 | 60 | 66 | Hypothetical | ||
| D06 | 4685-4455 | 77 | 65 | Conserved hypothetical; PtoDC3000 | AAO53570 | 70.5/2e−12; 34/75 (45) |
a
MF, miscellaneous feature.
b
Unless otherwise stated.
c
Abbreviations: Pma, P. syringae pv. maculicola; Pto, P. syringae pv. tomato.