TABLE 3.
Genes unique to Y. pestis strain 91001 represented on the microarray
| Gene identification | Gene name | Gene length (bp) | Annotated function |
|---|---|---|---|
| pCRY01 | repA | 714 | Putative RepA protein |
| pCRY02 | 252 | Hypothetical protein | |
| pCRY03 | hipB1 | 357 | Putative transcriptional regulators |
| pCRY04 | nusG | 456 | Transcription antiterminator |
| pCRY05 | 270 | Hypothetical protein | |
| pCRY06 | 219 | Putative ATP/GTP-binding protein remnant | |
| pCRY07 | virB1 | 711 | Type IV secretory pathway, VirB1 components |
| pCRY08 | virB2 | 306 | Type IV secretory pathway, VirB2 component, putative mating pair formation protein TraC |
| pCRY09 | virB4 | 2,685 | Type IV secretory pathway, VirB4 components |
| pCRY10 | virB5 | 705 | Type IV secretion system, VirB5 component |
| pCRY11 | 228 | Hypothetical protein | |
| pCRY12 | virB6 | 1,074 | Type IV secretory pathway, VirB6 components |
| pCRY13 | virB8 | 684 | Type IV secretion system, VirB8 component |
| pCRY14 | virB9 | 909 | Type IV secretory pathway, VirB9 components |
| pCRY15 | virB10 | 1,251 | Type IV secretory pathway, VirB10 components |
| pCRY16 | virB11 | 1,026 | Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagellar biosynthesis |
| pCRY17 | 399 | Hypothetical protein | |
| pCRY18 | 306 | Hypothetical protein | |
| pCRY19 | 306 | Putative dopa decarboxylase protein remnant | |
| pCRY20 | 294 | Hypothetical protein | |
| pCRY21 | 345 | Hypothetical protein | |
| pCRY22 | 1,752 | Putative mobilization protein MobC | |
| pCRY23 | 768 | Putative mobilization protein MobC | |
| pCRY24 | 474 | Micrococcal nuclease (thermonuclease) homologs | |
| pCRY25 | 342 | Putative membrane protein | |
| pCRY26 | 234 | Hypothetical protein | |
| pCRY27 | parA | 648 | ATPase involved in chromosome partitioning |
| pCRY28 | mpr | 861 | Zinc metalloproteinase Mpr protein |
| pCRY29 | hipB2 | 282 | Predicted transcriptional regulators |
| pCRY30 | 360 | Putative membrane protein | |
| pMT044 | 312 | Hypothetical protein | |
| pMT045 | 489 | Hypothetical protein | |
| pMT046 | 1,143 | Putative ribonucleoside-diphosphate reductase beta subunit | |
| pMT047 | 2,316 | Putative ribonucleoside-diphosphate reductase alpha subunit | |
| pMT086 | 306 | Putative C-type natriuretic protein | |
| pMT087 | 153 | Hypothetical protein | |
| pMT088 | 216 | Hypothetical protein | |
| pMT089 | 177 | Hypothetical protein | |
| pMT090 | 1,323 | Putative DNA ligase | |
| pMT091 | 255 | Hypothetical protein | |
| pMT092 | 477 | Hypothetical protein | |
| pMT093 | 342 | Hypothetical protein | |
| pMT094 | 192 | Hypothetical protein (pseudogene) | |
| pMT127 | 723 | Hypothetical protein (pseudogene) | |
| pMT128 | 606 | Hypothetical protein (pseudogene) | |
| YP0966 | rhlE | 918 | Probable ATP-dependent RNA helicase (pseudogene) |
| YP0969 | 375 | Hypothetical protein | |
| YP0970 | dnaJ1 | 555 | Molecular chaperones (contain C-terminal Zn finger domain) |
| YP0971 | 201 | Hypothetical protein | |
| YP0973 | srmB1 | 1,413 | Superfamily II DNA and RNA helicases |
| YP0974 | acrR3 | 711 | a1 regulator |
| YP0975 | acrA4 | 987 | Membrane fusion protein |
| YP0976 | ccmA2 | 1,743 | ABC-type multidrug transport system, ATPase component |
| YP0977 | 1,269 | ABC-type multidrug transport system, permease component | |
| YP0978 | 1,107 | ABC-type multidrug transport system, permease component | |
| YP0979 | 330 | Hypothetical protein | |
| YP0980 | 228 | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases | |
| YP0981 | lysR4 | 912 | Putative transcriptional regulator |
| YP0982 | nemA1 | 1,110 | NADH:flavin oxidoreductases, old yellow enzyme family |
| YP0983 | atoC1 | 1,293 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| YP0984 | baeS2 | 1,824 | Signal transduction histidine kinase |
| YP0985 | 474 | Hypothetical protein | |
| YP0986 | xapB | 609 | Xanthosine permease (pseudogene) |