TABLE 5.
Genomovars of Yersinia pestis based on DFR profiling
Genomovara | DFR profileb
|
|||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 02 | 03 | 04 | 05 | 06 | 07 | 08 | 09 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | |
Yps ancestor | − | − | − | + | + | + | + | + | + | + | + | + | − | + | + | + | + | + | + | + | + | + |
Ype ancestor | + | + | + | + | + | + | + | + | + | + | + | + | − | + | + | + | + | + | + | + | + | + |
01 | − | + | + | + | + | + | + | + | + | + | + | + | − | + | + | + | + | + | + | + | + | + |
02 | − | + | + | + | + | + | + | + | + | − | + | + | − | + | + | + | + | + | + | + | + | + |
03 | − | + | + | − | + | + | + | + | + | − | + | + | − | + | + | + | + | + | + | + | − | + |
04 | − | + | + | + | + | + | + | + | − | + | + | + | − | + | + | + | + | + | + | + | + | + |
05 | − | − | + | + | + | + | + | + | + | + | + | + | − | + | + | + | + | + | + | + | + | + |
06 | − | − | + | + | + | + | + | + | + | + | + | + | − | − | + | + | + | + | + | + | + | − |
07 | − | − | + | − | + | + | + | + | + | + | + | + | − | + | + | + | + | + | + | + | + | + |
08 | − | − | − | − | + | + | + | + | + | + | + | + | − | + | + | + | + | + | + | + | + | + |
09 | − | − | + | − | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
10 | − | + | + | + | + | − | − | + | + | + | + | + | − | + | − | − | + | + | + | + | + | + |
11 | − | + | + | + | + | − | − | + | + | + | + | + | − | + | − | − | − | + | + | + | + | + |
12 | − | + | + | + | − | − | − | + | + | + | + | + | − | + | − | − | − | + | + | + | + | + |
13 | − | + | + | + | + | − | − | − | + | + | + | + | − | + | − | − | − | + | + | + | + | + |
14 | + | + | + | + | + | − | + | + | + | + | − | − | − | + | + | + | + | − | − | − | + | + |
Yps ancestor is a presumed genomovar of the ancestral strains of Y. pseudotuberculosis. Ype ancestor is a presumed genomovar of the ancestral strains of Y. pestis.
+, present in the genome; −, absent from the genome.