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. 2004 Aug;186(15):5093–5100. doi: 10.1128/JB.186.15.5093-5100.2004

TABLE 2.

Kinetic parameters of LepB and LepA

Substrate LepB
LepA
Km (μM) kcata (s−1) kcat/Km (μM−1 s−1) Km (μM) kcata (s−1) kcat/Km (μM−1 s−1)
Boc-Val-Leu- Lys-MCAb 11 168 15 1.3 123 95
Bz-Lys-pNAc 67 3.0 0.045 65 5.7 0.088
Ac-Lys-pNAc 42 14 0.33 18 4.5 0.25
Lys-pNAc 100 0.21 0.0021 77 0.18 0.0023
a

Parameters were determined by Lineweaver-Burk plots, and the molecular masses of 28,916.2 and 27,735.9 Da calculated from the deduced amino acid sequences were used for the kcat values of LepB and LepA, respectively.

b

Reaction mixtures containing 0.5 to 30 μM Boc-Val-Leu-Lys-MCA and 20 mM Tris-HCl (pH 9.0) were incubated at 30°C for 5 min, and the reaction was initiated by the addition of LepB or LepA to a final concentration of 1 pM in a total volume of 3 ml. Increased fluorescence of liberated 7-amino-4-methylcoumarin was monitored at 440 nm upon excitation at 380 nm for 4 min.

c

Reaction mixtures containing 40 to 250 μM Bz-Lys-pNA, 20 to 200 μM Ac-Lys-pNA, or 35 to 250 μM Lys-pNA and 180 mM Tris-HCl (pH 9.2) were incubated at 30°C for 5 min, and the reaction was initiated by the addition of LepB or LepA to a final concentration of 16.6 nM for Bz-Lys-pNA, 4.1 nM for Ac-Lys-pNA, and 170 nM for Lys-pNA in a total volume of 0.75 ml. After 10 min of incubation, the reaction was terminated by adding 0.25 ml of 45% (vol/vol) acetic acid, and the absorbance at 405 nm was measured.